Ligand profile

CHEMBL1993431

Bioactivity hit from ChEMBL on a similar protein.

Bound to: VK055_2560 — chaperone protein DnaK

Via homolog UniProt P11021 Formula C₁₈H₁₃Br₂NO₃
Mol. weight 451.11 Da
Permeability Check
PAINS Clean

Identifiers

Database identifiers and provenance.

Ligand ID
CHEMBL1993431
UniProt (similar protein)
P11021
Target protein
VK055_2560

Structure

2D representation rendered from SMILES.

Physicochemical properties

Computed with RDKit from SMILES.

Molecular weight 451.11 Da
LogP (Crippen) 5.35
H-bond donors 2
H-bond acceptors 4
TPSA 62.58 Ų
Rotatable bonds 3
Aromatic rings 3 / 3
Heavy atoms 24
Fraction sp³ C 0.06
Formula C₁₈H₁₃Br₂NO₃

Drug-likeness

Descriptor-based ADME screening flags from SMILES. These are not experimental toxicity results.

Permeability proxy Check

Estimated from TPSA and LogP only: TPSA ≤ 90 Ų and −1 ≤ LogP ≤ 5 are treated as a favorable small-molecule permeability screen.

  • TPSA ≤ 90 Ų 62.6
  • −1 ≤ LogP ≤ 5 5.35
Lipinski's Rule of Five Pass 1 violation
  • MW ≤ 500 Da 451.1
  • LogP ≤ 5 5.35
  • H-bond donors ≤ 5 2
  • H-bond acceptors ≤ 10 4
Veber's rules Pass
  • Rotatable bonds ≤ 10 3
  • TPSA ≤ 140 Ų 62.6
PAINS Clean

No PAINS structural alerts detected.

Chemical representations

Canonical representations for cheminformatics workflows.

SMILES 
COc1cc(/C=C/c2ccc3c(Br)cc(Br)c(O)c3n2)ccc1O
InChI 
InChI=1S/C18H13Br2NO3/c1-24-16-8-10(3-7-15(16)22)2-4-11-5-6-12-13(19)9-14(20)18(23)17(12)21-11/h2-9,22-23H,1H3/b4-2+
InChIKey 
LJHFHFMKDNYWHI-DUXPYHPUSA-N

Provenance

Annotation context from LigQ_2, the internal Target step that collects PDB, ChEMBL, and ZINC ligand evidence.

Method
LigQ nearest_k
Source
ChEMBL
Activity
active
Binding sites
PF00012

External resources

Open this ligand in third-party databases and cheminformatics tools.

Other ligands for this protein

Quick navigation to other ligands bound to VK055_2560.

PDB 20

Ligands co-crystallized with this protein (structural evidence).

Ligand PDB entry

ChEMBL 99

Compounds with measured inhibitory activity on this target (higher pchembl = more potent).

Compound Potency (pchembl)

ZINC 50

Virtual screening candidates selected by structural similarity to known actives (Tanimoto ≥ 0.5).

Compound Similarity (Tanimoto)