Genome submission · Workspace pipeline

Add your own data

Upload a compressed GenBank record to create a genome workspace and queue a new target-prioritization run.

Workspace: public Input: .gbk.gz Gram: positive or negative

Browse genomes

Recent submissions 3

Pipeline Ready

Queue state No active jobs

Submit a genome dataset

Each submission is stored in this workspace and processed automatically through the full annotation and prioritization pipeline.

Genome accession

Used as the visible genome identifier in this workspace.

Gram type

This selects the default scoring context for the imported proteome.

Compressed GBK file

Upload a `.gbk.gz` file to run the genome pipeline.

What happens next

The dataset is queued, processed automatically, and then linked here as a finished protein ranking.

Before you submit

A few practical checks help the pipeline run smoothly and make the resulting workspace easier to interpret.

Use a stable accession

Pick the accession you want to recognize later in genome lists, scoring tables, and exported files.

Upload the annotated record

Provide the compressed GenBank record (`.gbk.gz`), not only a FASTA, so the pipeline can preserve feature structure and metadata.

Track the run here

Queued, running, finished, and failed submissions remain visible below, together with direct links to successful results.

Tip: If you want to inspect the workflow first, start with the test genome NZ_AP023069.1 and review the generated workspace before uploading your own dataset.

Recent submissions

Finished runs link directly to the resulting protein ranking. Failed runs keep the reported pipeline message for review.

Genome	Gram profile	Submitted	Status	Result
KpATCC43816	Gram-negative	2026-05-23 03:42	Finished	Open ranking
NC_002516.2	Gram-negative	2026-04-27 23:36	Finished	Open ranking
NZ_AP023069.1	Gram-negative	2026-04-26 20:05	Finished	Open ranking