Overview
Basic information about this protein and its source genome.
- Accession
- VK055_0557
- Gene
- ydcW AIK79180.1
- Status
- annotated
- Amino acids
- 475
- Structure source
- AlphaFold + ColabFold
Target profile
Computed evidence for target prioritization.
- Human off-target
- hit
- Human identity (%)
- 54.386
- Human E-value
- 3.63e-11
- Gut microbiome off-target
- hit
- Essential (DEG)
- Y
- DEG identity (%)
- 41.822
- DEG E-value
- 5.42e-111
- Localization
- Cytoplasmic
- ColabFold pLDDT
- 97.88
Selected Druggability evidence
AlphaFold / UniProt modelSelected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.
Sequence
Primary amino-acid sequence viewer.
Functional Annotations
Enzyme classification and Gene Ontology terms linked to this protein.
Gene Ontology (GO)
6- GO:0016620 Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
- GO:0016491 Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
- GO:0051287 Binding to nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
- GO:0009447 The chemical reactions and pathways resulting in the breakdown of putrescine, 1,4-diaminobutane; putrescine is the metabolic precursor of spermidine and spermine.
- GO:0019145 Catalysis of the reaction: 4-aminobutanal + NAD+ + H2O = 4-aminobutanoate + NADH + 2 H+.
- GO:0019477 The chemical reactions and pathways resulting in the breakdown of L-lysine.
Sequence Features
Domain/signature hits from InterPro and related databases.
Show feature table
| Start | End | DB | Term | Name |
|---|---|---|---|---|
| 245 | 252 | ProSitePatterns | PS00687 | Aldehyde dehydrogenases glutamic acid active site. |
| 245 | 252 | InterPro | IPR029510 | Aldehyde dehydrogenase, glutamic acid active site |
| 249 | 439 | Gene3D | G3DSA:3.40.309.10 | Aldehyde Dehydrogenase; Chain A, domain 2 |
| 249 | 439 | InterPro | IPR016163 | Aldehyde dehydrogenase, C-terminal |
| 1 | 474 | Hamap | MF_01275 | Gamma-aminobutyraldehyde dehydrogenase [patD]. |
| 1 | 474 | InterPro | IPR017749 | Gamma-aminobutyraldehyde dehydrogenase |
| 19 | 464 | Gene3D | G3DSA:3.40.605.10 | Aldehyde Dehydrogenase; Chain A, domain 1 |
| 19 | 464 | InterPro | IPR016162 | Aldehyde dehydrogenase, N-terminal |
| 249 | 442 | FunFam | G3DSA:3.40.309.10:FF:000010 | Gamma-aminobutyraldehyde dehydrogenase |
| 2 | 473 | SUPERFAMILY | SSF53720 | ALDH-like |
| 2 | 473 | InterPro | IPR016161 | Aldehyde/histidinol dehydrogenase |
| 4 | 473 | PANTHER | PTHR11699 | ALDEHYDE DEHYDROGENASE-RELATED |
| 21 | 472 | CDD | cd07092 | ALDH_ABALDH-YdcW |
| 21 | 472 | InterPro | IPR015657 | Aminobutyraldehyde dehydrogenase |
| 14 | 261 | FunFam | G3DSA:3.40.605.10:FF:000001 | Aldehyde dehydrogenase 1 |
| 2 | 473 | NCBIfam | TIGR03374 | aminobutyraldehyde dehydrogenase |
| 2 | 473 | InterPro | IPR017749 | Gamma-aminobutyraldehyde dehydrogenase |
| 13 | 470 | Pfam | PF00171 | Aldehyde dehydrogenase family |
| 13 | 470 | InterPro | IPR015590 | Aldehyde dehydrogenase domain |
3D Structure
Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.
Loading 3D structure...
Structural evidence
0 + 2Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.
| Entry | Method | Resolution | Chain | Coverage | Links | Status |
|---|---|---|---|---|---|---|
|
AlphaFold
AF_A0A0C7KN36
|
AlphaFold | — | — | full sequence | — | Viewing |
|
ColabFold
VK055_0557
|
ColabFold | — | — | full sequence | — | Loaded |
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer
Pockets (FPOCKET)
Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).
| FPOCKET | Sticks | Spheres | Surfaces | Druggability | Labels | Zoom | Positions |
|---|---|---|---|---|---|---|---|
| 21 | 0.486 |
Pockets (P2RANK)
Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).
| P2RANK | Sticks | Spheres | Surfaces | Score | Probability | Labels | Zoom | Positions |
|---|---|---|---|---|---|---|---|---|
| 1 | 16.7 | 0.785 | ||||||
| 2 | 11.82 | 0.627 | ||||||
| 3 | 5.36 | 0.254 | ||||||
| 4 | 1.62 | 0.026 | ||||||
| 5 | 1.39 | 0.017 |
Pockets (FPOCKET)
Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).
| FPOCKET | Sticks | Spheres | Surfaces | Druggability | Labels | Zoom | Positions |
|---|---|---|---|---|---|---|---|
| 1 | 0.868 | ||||||
| 2 | 0.633 |
Pockets (P2RANK)
Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).
| P2RANK | Sticks | Spheres | Surfaces | Score | Probability | Labels | Zoom | Positions |
|---|---|---|---|---|---|---|---|---|
| 1 | 31.97 | 0.941 | ||||||
| 2 | 2.02 | 0.044 | ||||||
| 3 | 1.72 | 0.03 | ||||||
| 4 | 1.7 | 0.03 |
Ligand evidence
Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.
Highest-confidence structural evidence: ligands co-crystallized with this exact protein. If the source PDB is loaded in TPW, use Open crystal to inspect it in the structure viewer.
No PDB structure with a co-crystallized ligand found for this exact protein.
Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.
| Ligand | Source crystal | UniProt (homolog) | MW · LogP · TPSA | Lipinski | PAINS | SMILES |
|---|---|---|---|---|---|---|
| 0D8 | P17202 | 75.1 Da LogP -0.67 TPSA 46.2 | ✓ Ro5 | ✓ Clean |
C(CN)CO
|
|
| 7PE | Q9HTJ1 | 310.4 Da LogP 0.10 TPSA 75.6 | ✓ Ro5 | ✓ Clean |
CCOCCOCCOCCOCCOCCOCCO
|
|
| AE3 | P17202 | 134.2 Da LogP 0.03 TPSA 38.7 | ✓ Ro5 | ✓ Clean |
CCOCCOCCO
|
|
| B3P | A0A0H2X0S3 | 282.3 Da LogP -4.01 TPSA 145.4 | 1 viol. | ✓ Clean |
C(CNC(CO)(CO)CO)CNC(CO)(CO)CO
|
|
| BTL | P77674 | 102.2 Da LogP -0.11 TPSA 17.1 | ✓ Ro5 | ✓ Clean |
C[N+](C)(C)CC=O
|
|
| CHT | P17202 | 104.2 Da LogP -0.32 TPSA 20.2 | ✓ Ro5 | ✓ Clean |
C[N+](C)(C)CCO
|
|
| CQY | O94788 | 430.5 Da LogP 3.62 TPSA 79.2 | ✓ Ro5 | ✓ Clean |
CCOc1ccsc1C(=O)N2CCN(CC2)c3ccc(c(c3)N4CCCC4)[N+…
|
|
| CU4 | O94788 | 460.5 Da LogP 4.21 TPSA 104.8 | ✓ Ro5 | ✓ Clean |
CS(=O)(=O)c1ccc(cc1)c2c(cn(n2)c3ccc(cc3)C#N)C(=…
|
|
| DTT | Q9HTJ1 | 154.3 Da LogP -0.43 TPSA 40.5 | ✓ Ro5 | ✓ Clean |
C([C@@H]([C@H](CS)O)O)S
|
|
| ETX | P17202 | 90.1 Da LogP 0.02 TPSA 29.5 | ✓ Ro5 | ✓ Clean |
CCOCCO
|
|
| PE4 | Q9HTJ1 | 354.4 Da LogP 0.11 TPSA 84.8 | ✓ Ro5 | ✓ Clean |
CCOCCOCCOCCOCCOCCOCCOCCO
|
|
| TOE | Q9HTJ1 | 164.2 Da LogP -0.34 TPSA 47.9 | ✓ Ro5 | ✓ Clean |
COCCOCCOCCO
|
|
| TXE | Q9HTJ1 | 667.5 Da LogP -2.95 TPSA 317.6 | 3 viol. | ✓ Clean |
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)…
|
Experimental bioactivity from ChEMBL measured directly on this protein. Score = pchembl (−log Ki/IC₅₀; higher = more potent).
No ChEMBL bioactivity data found for this exact protein.
Bioactivity inferred from similar proteins in ChEMBL. Score = pchembl (−log Ki/IC₅₀; higher = more potent).
| Ligand | UniProt (homolog) | pchembl | MW · LogP · TPSA | Lipinski | PAINS | SMILES |
|---|---|---|---|---|---|---|
| CHEMBL4849586 | O94788 | 7.68 | 405.5 Da LogP 3.40 TPSA 74.8 | ✓ Ro5 | ✓ Clean |
CC(Sc1nc2nn(C3COC3)cc2c(=O)n1-c1ccccc1)c1ccccn1
|
| CHEMBL4876602 | O94788 | 7.40 | 362.5 Da LogP 3.97 TPSA 52.7 | ✓ Ro5 | ✓ Clean |
C[C@@H](Sc1nc2c(cnn2C)c(=O)n1-c1ccccc1)c1ccccc1
|
| CW2 | O94788 | 7.25 | 366.1 Da LogP 3.17 TPSA 58.2 | ✓ Ro5 | ✓ Clean |
C(CCCCNC(=O)C(Cl)Cl)CCCNC(=O)C(Cl)Cl
|
| CHEMBL4846203 | O94788 | 7.24 | 405.5 Da LogP 3.40 TPSA 74.8 | ✓ Ro5 | ✓ Clean |
CC(Sc1nc2nn(C3COC3)cc2c(=O)n1-c1ccccc1)c1cccnc1
|
| CHEMBL4875157 | O94788 | 7.20 | 363.4 Da LogP 3.37 TPSA 65.6 | ✓ Ro5 | ✓ Clean |
CC(Sc1nc2c(cnn2C)c(=O)n1-c1ccccc1)c1ccccn1
|
| CHEMBL4090473 | O94788 | 7.19 | 268.3 Da LogP 4.03 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
Cc1oc2cc3oc(=O)c4c(c3cc2c1C)CCCC4
|
| CHEMBL4286209 | O94788 | 7.19 | 367.4 Da LogP 6.89 TPSA 17.1 | 1 viol. | ✓ Clean |
CC1=C(/C=C/C(C)=C/C=C/C(C)=C/C(=O)C(Cl)Cl)C(C)(…
|
| CHEMBL4847114 | O94788 | 7.19 | 404.5 Da LogP 4.01 TPSA 61.9 | ✓ Ro5 | ✓ Clean |
CC(Sc1nc2nn(C3COC3)cc2c(=O)n1-c1ccccc1)c1ccccc1
|
| CHEMBL1562069 | O94788 | 7.16 | 256.3 Da LogP 4.11 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
CCCc1cc(=O)oc2cc3oc(C)c(C)c3cc12
|
| CHEMBL4859904 | O94788 | 7.10 | 418.5 Da LogP 4.08 TPSA 61.9 | ✓ Ro5 | ✓ Clean |
CC(Sc1nc2nn(CC3COC3)cc2c(=O)n1-c1ccccc1)c1ccccc1
|
| CHEMBL4855442 | O94788 | 7.05 | 363.4 Da LogP 3.37 TPSA 65.6 | ✓ Ro5 | ✓ Clean |
CC(Sc1nc2c(cnn2C)c(=O)n1-c1ccccc1)c1cccnc1
|
| CHEMBL4848831 | O94788 | 7.00 | 378.5 Da LogP 3.68 TPSA 72.9 | ✓ Ro5 | ✓ Clean |
CC(Sc1nc2c(cnn2C)c(=O)n1-c1ccccc1)c1cccc(O)c1
|
| CHEMBL5269320 | O94788 | 7.00 | 354.4 Da LogP 3.93 TPSA 41.6 | ✓ Ro5 | ✓ Clean |
O=C1CCc2cc(OCCN3CCC[C@@H]3c3cccc(F)c3)ccc2N1
|
| CHEMBL5283146 | O94788 | 7.00 | 354.4 Da LogP 3.93 TPSA 41.6 | ✓ Ro5 | ✓ Clean |
O=C1CCc2cc(OCCN3CCCC3c3cccc(F)c3)ccc2N1
|
| CHEMBL4846491 | O94788 | 6.97 | 392.5 Da LogP 3.98 TPSA 61.9 | ✓ Ro5 | ✓ Clean |
COc1cccc(C(C)Sc2nc3c(cnn3C)c(=O)n2-c2ccccc2)c1
|
| CHEMBL4848258 | O94788 | 6.96 | 362.5 Da LogP 3.97 TPSA 52.7 | ✓ Ro5 | ✓ Clean |
CC(Sc1nc2c(cnn2C)c(=O)n1-c1ccccc1)c1ccccc1
|
| CHEMBL4862833 | O94788 | 6.96 | 380.4 Da LogP 4.11 TPSA 52.7 | ✓ Ro5 | ✓ Clean |
CC(Sc1nc2c(cnn2C)c(=O)n1-c1ccccc1)c1cccc(F)c1
|
| CHEMBL4861872 | O94788 | 6.95 | 418.5 Da LogP 4.18 TPSA 61.9 | ✓ Ro5 | ✓ Clean |
CC(Sc1nc2nn(C3(C)COC3)cc2c(=O)n1-c1ccccc1)c1ccc…
|
| CHEMBL1349972 | O94788 | 6.89 | 254.3 Da LogP 3.64 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
Cc1oc2cc3oc(=O)c4c(c3cc2c1C)CCC4
|
| CHEMBL4874309 | O94788 | 6.87 | 392.5 Da LogP 3.98 TPSA 61.9 | ✓ Ro5 | ✓ Clean |
COc1ccccc1C(C)Sc1nc2c(cnn2C)c(=O)n1-c1ccccc1
|
| CHEMBL4213331 | O94788 | 6.82 | 366.4 Da LogP 3.55 TPSA 52.7 | ✓ Ro5 | ✓ Clean |
Cn1ncc2c(=O)n(-c3ccccc3)c(SCc3cccc(F)c3)nc21
|
| CHEMBL4873090 | O94788 | 6.77 | 373.4 Da LogP 3.75 TPSA 56.9 | ✓ Ro5 | ✓ Clean |
Cn1ncc2c(=O)n(-c3ccccc3)c3c(c21)C(=O)C(c1ccccc1…
|
| CHEMBL4876076 | O94788 | 6.75 | 376.5 Da LogP 4.36 TPSA 52.7 | ✓ Ro5 | ✓ Clean |
CCC(Sc1nc2c(cnn2C)c(=O)n1-c1ccccc1)c1ccccc1
|
| CHEMBL4867380 | O94788 | 6.67 | 406.5 Da LogP 3.51 TPSA 72.9 | ✓ Ro5 | ✓ Clean |
CC(Sc1nc2c(cnn2C)c(=O)n1-c1ccc(CCO)cc1)c1ccccc1
|
| CHEMBL4216790 | O94788 | 6.64 | 408.5 Da LogP 3.58 TPSA 61.9 | ✓ Ro5 | ✓ Clean |
O=c1c2cnn(C3COC3)c2nc(SCc2cccc(F)c2)n1-c1ccccc1
|
| CHEMBL4873315 | O94788 | 6.62 | 365.4 Da LogP 4.16 TPSA 39.8 | ✓ Ro5 | ✓ Clean |
Cn1ncc2c(=O)n(-c3ccccc3)c(SCc3cccc(F)c3)cc21
|
| A5Y | O94788 | 6.60 | 408.5 Da LogP 3.58 TPSA 61.9 | ✓ Ro5 | ✓ Clean |
c1ccc(cc1)N2C(=O)c3cn(nc3N=C2SCc4cccc(c4)F)C5CO…
|
| CHEMBL4868666 | O94788 | 6.57 | 371.5 Da LogP 4.58 TPSA 39.8 | ✓ Ro5 | ✓ Clean |
Cn1ncc2c(=O)n(-c3ccccc3)c3c(c21)C=CC(c1ccccc1)S3
|
| 6ZE | O94788 | 6.52 | 270.3 Da LogP 4.42 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
CCCC1=C(c2cc3c(c(oc3cc2OC1=O)C)C)C
|
| CHEMBL4863668 | O94788 | 6.52 | 390.5 Da LogP 4.61 TPSA 52.7 | ✓ Ro5 | ✓ Clean |
CC(C)C(Sc1nc2c(cnn2C)c(=O)n1-c1ccccc1)c1ccccc1
|
| CHEMBL4072941 | O94788 | 6.48 | 242.3 Da LogP 3.77 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
Cc1oc2cc3oc(=O)c(C)c(C)c3cc2c1C
|
| CHEMBL4214509 | O94788 | 6.47 | 366.4 Da LogP 3.55 TPSA 52.7 | ✓ Ro5 | ✓ Clean |
Cn1cc2c(=O)n(-c3ccccc3)c(SCc3cccc(F)c3)nc2n1
|
| CHEMBL4849624 | O94788 | 6.42 | 364.4 Da LogP 2.76 TPSA 78.5 | ✓ Ro5 | ✓ Clean |
CC(Sc1nc2c(cnn2C)c(=O)n1-c1ccccc1)c1cncnc1
|
| CHEMBL4860590 | O94788 | 6.40 | 387.5 Da LogP 4.14 TPSA 56.9 | ✓ Ro5 | ✓ Clean |
Cn1ncc2c(=O)n(-c3ccccc3)c3c(c21)C(=O)CC(c1ccccc…
|
| CHEMBL4848961 | O94788 | 6.36 | 346.4 Da LogP 3.43 TPSA 52.7 | ✓ Ro5 | ✓ Clean |
Cn1ncc2c(=O)n(-c3ccccc3)c(/C=C/c3cccc(F)c3)nc21
|
| CHEMBL4217452 | O94788 | 6.32 | 422.5 Da LogP 3.66 TPSA 61.9 | ✓ Ro5 | ✓ Clean |
O=c1c2cn(CC3COC3)nc2nc(SCc2cccc(F)c2)n1-c1ccccc1
|
| CHEMBL4210318 | O94788 | 6.25 | 400.9 Da LogP 4.20 TPSA 52.7 | ✓ Ro5 | ✓ Clean |
Cn1ncc2c(=O)n(-c3cccc(Cl)c3)c(SCc3cccc(F)c3)nc21
|
| CHEMBL4866017 | O94788 | 6.22 | 392.5 Da LogP 3.46 TPSA 72.9 | ✓ Ro5 | ✓ Clean |
CC(Sc1nc2c(cnn2C)c(=O)n1-c1ccc(CO)cc1)c1ccccc1
|
| CHEMBL4217294 | O94788 | 6.17 | 352.4 Da LogP 3.54 TPSA 63.6 | ✓ Ro5 | ✓ Clean |
O=c1c2cn[nH]c2nc(SCc2cccc(F)c2)n1-c1ccccc1
|
| CHEMBL4209261 | O94788 | 6.14 | 380.4 Da LogP 3.61 TPSA 52.7 | ✓ Ro5 | ✓ Clean |
Cn1ncc2c(=O)n(Cc3ccccc3)c(SCc3cccc(F)c3)nc21
|
| CHEMBL4064364 | O94788 | 6.12 | 256.3 Da LogP 4.11 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
CCCc1c(C)c2cc3c(C)coc3cc2oc1=O
|
| CHEMBL4877915 | O94788 | 6.10 | 386.5 Da LogP 3.95 TPSA 52.7 | ✓ Ro5 | ✓ Clean |
C#Cc1ccc(-n2c(SC(C)c3ccccc3)nc3c(cnn3C)c2=O)cc1
|
| CHEMBL4865571 | O94788 | 6.09 | 365.4 Da LogP 4.16 TPSA 39.8 | ✓ Ro5 | ✓ Clean |
Cn1ccc2c(=O)n(-c3ccccc3)c(SCc3cccc(F)c3)nc21
|
| CHEMBL4213859 | O94788 | 6.05 | 394.5 Da LogP 3.80 TPSA 52.7 | ✓ Ro5 | ✓ Clean |
Cn1ncc2c(=O)n(CCc3ccccc3)c(SCc3cccc(F)c3)nc21
|
| CHEMBL4871374 | O94788 | 6.05 | 408.9 Da LogP 3.79 TPSA 41.4 | ✓ Ro5 | ✓ Clean |
O=C(C1CC1)N1CCN(Cc2nc3ccccc3n2Cc2cccc(Cl)c2)CC1
|
| CHEMBL4642789 | O94788 | 6.04 | 328.4 Da LogP 4.45 TPSA 43.6 | ✓ Ro5 | ✓ Clean |
COC(=O)c1ccc(-c2cccn3cc(-c4ccccc4)nc23)cc1
|
| CHEMBL5271934 | O94788 | 6.00 | 410.5 Da LogP 4.15 TPSA 74.3 | ✓ Ro5 | ✓ Clean |
CN(C)c1nc(-c2cccc(F)c2)c(C(=O)Nc2ccc3c(c2)CCC(=…
|
| CHEMBL5274968 | O94788 | 6.00 | 367.4 Da LogP 4.09 TPSA 71.1 | ✓ Ro5 | ✓ Clean |
O=C1CCc2cc(NC(=O)c3scnc3-c3cccc(F)c3)ccc2N1
|
| CHEMBL5291299 | O94788 | 6.00 | 367.4 Da LogP 4.09 TPSA 71.1 | ✓ Ro5 | ✓ Clean |
O=C1CCc2cc(NC(=O)c3scnc3-c3ccccc3F)ccc2N1
|
| 3SR | O94788 | — | 442.5 Da LogP 1.03 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
CC(C)CCn1c(nc2c1C(=O)N(C(=O)N2C)C)CN3CCN(CC3)C(…
|
| CHEMBL2360124 | O94788 | — | 373.4 Da LogP 0.46 TPSA 74.3 | ✓ Ro5 | ✓ Clean |
Cn1c(=O)c2c(nc(N3CCOCC3)n2Cc2ccccc2F)n(C)c1=O
|
| CHEMBL3416557 | O94788 | — | 476.5 Da LogP 1.34 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
Cc1cccc(Cn2c(CN3CCN(C(=O)c4ccco4)CC3)nc3c2c(=O)…
|
| KXT | O94788 | — | 270.3 Da LogP 4.67 TPSA 17.3 | ✓ Ro5 | ✓ Clean |
c1ccc(cc1)c2ccc3nc(cn3c2)c4ccccc4
|
| M39 | O94788 | — | 366.4 Da LogP 3.85 TPSA 63.6 | ✓ Ro5 | ✓ Clean |
Cc1ccccc1N2C(=O)c3c[nH]nc3N=C2SCc4cccc(c4)F
|
Proposed virtual-screening candidates from ZINC. Score = Tanimoto similarity to a known binder (0–1; higher = more similar).
| Ligand | Tanimoto | MW · LogP · TPSA | Lipinski | PAINS | SMILES |
|---|---|---|---|---|---|
| ZINC12563645 | 1.000 | 373.4 Da LogP 0.46 TPSA 74.3 | ✓ Ro5 | ✓ Clean |
Cn1c(=O)c2c(nc(N3CCOCC3)n2Cc2ccccc2F)n(C)c1=O
|
| ZINC142862208 | 1.000 | 270.3 Da LogP 4.67 TPSA 17.3 | ✓ Ro5 | ✓ Clean |
c1ccc(-c2ccc3nc(-c4ccccc4)cn3c2)cc1
|
| ZINC1580161 | 1.000 | 208.3 Da LogP -0.33 TPSA 57.2 | ✓ Ro5 | ✓ Clean |
COCCOCCOCCOCCO
|
| ZINC16052118 | 1.000 | 340.4 Da LogP -0.28 TPSA 84.8 | ✓ Ro5 | ✓ Clean |
COCCOCCOCCOCCOCCOCCOCCO
|
| ZINC16052257 | 1.000 | 384.5 Da LogP -0.26 TPSA 94.1 | ✓ Ro5 | ✓ Clean |
COCCOCCOCCOCCOCCOCCOCCOCCO
|
| ZINC2048536902 | 1.000 | 430.5 Da LogP 3.62 TPSA 79.2 | ✓ Ro5 | ✓ Clean |
CCOc1ccsc1C(=O)N1CCN(c2ccc([N+](=O)[O-])c(N3CCC…
|
| ZINC20533290 | 1.000 | 442.5 Da LogP 1.03 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
CC(C)CCn1c(CN2CCN(C(=O)c3ccco3)CC2)nc2c1c(=O)n(…
|
| ZINC20533434 | 1.000 | 476.5 Da LogP 1.34 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
Cc1cccc(Cn2c(CN3CCN(C(=O)c4ccco4)CC3)nc3c2c(=O)…
|
| ZINC34317654 | 1.000 | 472.6 Da LogP -0.23 TPSA 112.5 | 1 viol. | ✓ Clean |
COCCOCCOCCOCCOCCOCCOCCOCCOCCOCCO
|
| ZINC407801 | 1.000 | 268.3 Da LogP 4.03 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
Cc1oc2cc3oc(=O)c4c(c3cc2c1C)CCCC4
|
| ZINC44076059 | 1.000 | 428.5 Da LogP -0.24 TPSA 103.3 | ✓ Ro5 | ✓ Clean |
COCCOCCOCCOCCOCCOCCOCCOCCOCCO
|
| ZINC4521259 | 1.000 | 282.3 Da LogP -4.01 TPSA 145.4 | 1 viol. | ✓ Clean |
OCC(CO)(CO)NCCCNC(CO)(CO)CO
|
| ZINC5210101 | 1.000 | 252.3 Da LogP -0.31 TPSA 66.4 | ✓ Ro5 | ✓ Clean |
COCCOCCOCCOCCOCCO
|
| ZINC5650743 | 1.000 | 222.3 Da LogP 0.07 TPSA 57.2 | ✓ Ro5 | ✓ Clean |
CCOCCOCCOCCOCCO
|
| ZINC5997860 | 1.000 | 296.4 Da LogP -0.29 TPSA 75.6 | ✓ Ro5 | ✓ Clean |
COCCOCCOCCOCCOCCOCCO
|
| ZINC6403917 | 1.000 | 354.4 Da LogP 0.11 TPSA 84.8 | ✓ Ro5 | ✓ Clean |
CCOCCOCCOCCOCCOCCOCCOCCO
|
| ZINC8830013 | 1.000 | 366.4 Da LogP 3.85 TPSA 63.6 | ✓ Ro5 | ✓ Clean |
Cc1ccccc1-n1c(SCc2cccc(F)c2)nc2n[nH]cc2c1=O
|
| ZINC95201 | 1.000 | 256.3 Da LogP 4.11 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
CCCc1cc(=O)oc2cc3oc(C)c(C)c3cc12
|
| ZINC95209 | 1.000 | 242.3 Da LogP 3.77 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
Cc1oc2cc3oc(=O)c(C)c(C)c3cc2c1C
|
| ZINC95243 | 1.000 | 256.3 Da LogP 4.11 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
CCCc1c(C)c2cc3c(C)coc3cc2oc1=O
|
| ZINC95245 | 1.000 | 270.3 Da LogP 4.42 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
CCCc1c(C)c2cc3c(C)c(C)oc3cc2oc1=O
|
| ZINC489383 | 0.970 | 282.3 Da LogP 4.42 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
Cc1oc2cc3oc(=O)c4c(c3cc2c1C)CCCCC4
|
| ZINC95218 | 0.939 | 254.3 Da LogP 3.64 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
Cc1oc2cc3oc(=O)c4c(c3cc2c1C)CCC4
|
| ZINC11691926 | 0.872 | 284.4 Da LogP 4.89 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
CCCCCc1c(C)c2cc3c(C)coc3cc2oc1=O
|
| ZINC20029389 | 0.852 | 428.5 Da LogP 0.64 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
CC(C)Cn1c(CN2CCN(C(=O)c3ccco3)CC2)nc2c1c(=O)n(C…
|
| ZINC20533508 | 0.844 | 476.5 Da LogP 1.34 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
Cc1ccc(Cn2c(CN3CCN(C(=O)c4ccco4)CC3)nc3c2c(=O)n…
|
| ZINC2126459 | 0.838 | 270.3 Da LogP 4.50 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
CCCCc1cc(=O)oc2cc3oc(C)c(C)c3cc12
|
| ZINC12531996 | 0.836 | 414.5 Da LogP 0.39 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
CCCn1c(CN2CCN(C(=O)c3ccco3)CC2)nc2c1c(=O)n(C)c(…
|
| ZINC17440284 | 0.833 | 497.0 Da LogP 1.69 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
Cn1c(=O)c2c(nc(CN3CCN(C(=O)c4ccco4)CC3)n2Cc2ccc…
|
| ZINC20517465 | 0.825 | 462.5 Da LogP 1.03 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
Cn1c(=O)c2c(nc(CN3CCN(C(=O)c4ccco4)CC3)n2Cc2ccc…
|
| ZINC1238419 | 0.824 | 357.4 Da LogP 1.22 TPSA 65.1 | ✓ Ro5 | ✓ Clean |
Cn1c(=O)c2c(nc(N3CCCC3)n2Cc2ccccc2F)n(C)c1=O
|
| ZINC12531555 | 0.820 | 400.4 Da LogP 0.00 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
CCn1c(CN2CCN(C(=O)c3ccco3)CC2)nc2c1c(=O)n(C)c(=…
|
| ZINC20503267 | 0.810 | 442.5 Da LogP 1.17 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
CCCCCn1c(CN2CCN(C(=O)c3ccco3)CC2)nc2c1c(=O)n(C)…
|
| ZINC20513026 | 0.810 | 476.5 Da LogP 1.23 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
Cn1c(=O)c2c(nc(CN3CCN(C(=O)c4ccco4)CC3)n2CCc2cc…
|
| ZINC20519601 | 0.810 | 428.5 Da LogP 0.78 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
CCCCn1c(CN2CCN(C(=O)c3ccco3)CC2)nc2c1c(=O)n(C)c…
|
| ZINC20533474 | 0.810 | 430.5 Da LogP -0.63 TPSA 118.7 | ✓ Ro5 | ✓ Clean |
Cn1c(=O)c2c(nc(CN3CCN(C(=O)c4ccco4)CC3)n2CCCO)n…
|
| ZINC20518480 | 0.809 | 490.6 Da LogP 1.65 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
Cc1ccc(C)c(Cn2c(CN3CCN(C(=O)c4ccco4)CC3)nc3c2c(…
|
| ZINC789694 | 0.808 | 386.4 Da LogP 0.37 TPSA 68.3 | ✓ Ro5 | ✓ Clean |
CN1CCN(c2nc3c(c(=O)n(C)c(=O)n3C)n2Cc2ccccc2F)CC1
|
| ZINC851616 | 0.808 | 371.4 Da LogP 1.61 TPSA 65.1 | ✓ Ro5 | ✓ Clean |
Cn1c(=O)c2c(nc(N3CCCCC3)n2Cc2ccccc2F)n(C)c1=O
|
| ZINC95196 | 0.800 | 242.3 Da LogP 3.72 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
CCc1cc(=O)oc2cc3oc(C)c(C)c3cc12
|
| ZINC20503461 | 0.797 | 430.5 Da LogP -0.37 TPSA 107.7 | ✓ Ro5 | ✓ Clean |
COCCn1c(CN2CCN(C(=O)c3ccco3)CC2)nc2c1c(=O)n(C)c…
|
| ZINC20517639 | 0.797 | 456.5 Da LogP 1.57 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
CCCCCCn1c(CN2CCN(C(=O)c3ccco3)CC2)nc2c1c(=O)n(C…
|
| ZINC22474816 | 0.797 | 485.5 Da LogP -0.68 TPSA 111.0 | 1 viol. | ✓ Clean |
Cn1c(=O)c2c(nc(CN3CCN(C(=O)c4ccco4)CC3)n2CCN2CC…
|
| ZINC2326668 | 0.797 | 470.6 Da LogP 1.96 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
CCCCCCCn1c(CN2CCN(C(=O)c3ccco3)CC2)nc2c1c(=O)n(…
|
| ZINC13739075 | 0.796 | 373.4 Da LogP 0.46 TPSA 74.3 | ✓ Ro5 | ✓ Clean |
Cn1c(N2CCOCC2)nc2c1c(=O)n(Cc1ccccc1F)c(=O)n2C
|
| ZINC488584 | 0.795 | 242.3 Da LogP 3.72 TPSA 43.4 | ✓ Ro5 | ✓ Clean |
CCc1c(C)c2cc3c(C)coc3cc2oc1=O
|
| ZINC20519054 | 0.794 | 428.4 Da LogP -0.43 TPSA 115.6 | ✓ Ro5 | ✓ Clean |
CC(=O)Cn1c(CN2CCN(C(=O)c3ccco3)CC2)nc2c1c(=O)n(…
|
| ZINC12530447 | 0.789 | 408.9 Da LogP 3.79 TPSA 41.4 | ✓ Ro5 | ✓ Clean |
O=C(C1CC1)N1CCN(Cc2nc3cc(Cl)ccc3n2Cc2ccccc2)CC1
|
| ZINC12651979 | 0.788 | 462.5 Da LogP 1.35 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
Cc1cccc(Cn2c(N3CCN(C(=O)c4ccco4)CC3)nc3c2c(=O)n…
|
| ZINC20533342 | 0.788 | 497.0 Da LogP 1.69 TPSA 98.5 | ✓ Ro5 | ✓ Clean |
Cn1c(=O)c2c(nc(CN3CCN(C(=O)c4ccco4)CC3)n2Cc2ccc…
|
PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.