Protein profile

VK055_0872

marB family protein

Genome: KpATCC43816

Gene: AIK79495.1 marB Structure source: AlphaFold + ColabFold UniProt A0A0H3GX89
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Amino acids 72
Annotations 0
Features 10
PDB binders 0
Druggability 0.001

Overview

Basic information about this protein and its source genome.

Accession
VK055_0872
Assembly
Klebsiella pneumoniae subsp. pneumoniae strain ATCC 43816 KPPR1, complete genome
Gene
AIK79495.1 marB
Status
annotated
Amino acids
72
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
Unknown
ColabFold pLDDT
66.28

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.001
Structure A0A0H3GX89
Pocket Pocket 1
P2Rank
Structure A0A0H3GX89
Pocket No pockets
ColabFold model
FPocket 0.023 · Pocket 4
Core conservation Accessory gene
Roary core
CoreCruncher accessory
Gut microbiome 52 / 4744 genomes with a hit
Normalized 0.011

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

10 records
Show feature table
Start End DB Term Name
1 21 SignalP_EUK SignalP-noTM SignalP-noTM
15 21 Phobius SIGNAL_PEPTIDE_C_REGION C-terminal region of a signal peptide.
1 21 SignalP_GRAM_POSITIVE SignalP-TM SignalP-TM
47 72 MobiDBLite mobidb-lite consensus disorder prediction
1 2 Phobius SIGNAL_PEPTIDE_N_REGION N-terminal region of a signal peptide.
3 14 Phobius SIGNAL_PEPTIDE_H_REGION Hydrophobic region of a signal peptide.
22 72 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
6 70 Pfam PF13999 MarB protein
6 70 InterPro IPR025732 MarB protein
1 21 Phobius SIGNAL_PEPTIDE Signal peptide region

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

No pockets are loaded yet for the displayed AlphaFold model AF_A0A0H3GX89 structure. Run experimental pocket backfill to show FPocket/P2Rank overlays on this structure.

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GX89
AlphaFold — — full sequence — Viewing
ColabFold VK055_0872
ColabFold — — full sequence — Loaded