Protein profile

VK055_0999

ydfZ family protein

Genome: KpATCC43816

Gene: AIK79622.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GSS5
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Amino acids 67
Annotations 0
Features 4
PDB binders 0
Druggability 0.002

Overview

Basic information about this protein and its source genome.

Accession
VK055_0999
Assembly
Klebsiella pneumoniae subsp. pneumoniae strain ATCC 43816 KPPR1, complete genome
Gene
AIK79622.1
Status
annotated
Amino acids
67
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
Unknown
ColabFold pLDDT
92.68

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.002
Structure A0A0H3GSS5
Pocket Pocket 2
P2Rank
Structure A0A0H3GSS5
Pocket No pockets
ColabFold model
FPocket 0.243 · Pocket 3
Core conservation Accessory gene
Roary core
CoreCruncher accessory
Gut microbiome 57 / 4744 genomes with a hit
Normalized 0.012

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

4 records
Show feature table
Start End DB Term Name
2 65 Pfam PF14001 YdfZ protein
2 65 InterPro IPR017704 Putative selenium-binding protein YdfZ
1 65 NCBIfam TIGR03318 putative selenium delivery protein YdfZ
1 65 InterPro IPR017704 Putative selenium-binding protein YdfZ

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GSS5
AlphaFold — — full sequence — Viewing
ColabFold VK055_0999
ColabFold — — full sequence — Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer