Protein profile

VK055_4241

hypothetical protein

Genome: KpATCC43816

Gene: AIK82786.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GY05
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Amino acids 69
Annotations 0
Features 15
PDB binders 0
Druggability 0.563

Overview

Basic information about this protein and its source genome.

Accession
VK055_4241
Assembly
Klebsiella pneumoniae subsp. pneumoniae strain ATCC 43816 KPPR1, complete genome
Gene
AIK82786.1
Status
annotated
Amino acids
69
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
Y
DEG identity (%)
41.071
DEG E-value
2.44e-09
Localization
Unknown
ColabFold pLDDT
81.08

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.563
Structure A0A0H3GY05
Pocket Pocket 2
P2Rank
Structure A0A0H3GY05
Pocket No pockets
ColabFold model
FPocket 0.527 · Pocket 2
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 59 / 4744 genomes with a hit
Normalized 0.012

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

15 records
Show feature table
Start End DB Term Name
25 67 Pfam PF07338 YdgH/BhsA/McbA-like domain
25 67 InterPro IPR010854 YdgH/BhsA/McbA-like domain
1 22 SignalP_GRAM_NEGATIVE SignalP-noTM SignalP-noTM
3 67 SUPERFAMILY SSF159871 YdgH-like
3 67 InterPro IPR036275 YdgH-like superfamily
1 5 Phobius SIGNAL_PEPTIDE_N_REGION N-terminal region of a signal peptide.
6 17 Phobius SIGNAL_PEPTIDE_H_REGION Hydrophobic region of a signal peptide.
1 29 SignalP_EUK SignalP-noTM SignalP-noTM
1 29 SignalP_GRAM_POSITIVE SignalP-TM SignalP-TM
1 29 Phobius SIGNAL_PEPTIDE Signal peptide region
18 29 Phobius SIGNAL_PEPTIDE_C_REGION C-terminal region of a signal peptide.
7 29 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
30 69 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
16 69 Gene3D G3DSA:3.30.1660.10 -
16 69 InterPro IPR025543 Dodecin-like

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GY05
AlphaFold — — full sequence — Viewing
ColabFold VK055_4241
ColabFold — — full sequence — Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
2 0.563
1 0.194
3 0.001
4 0.001