Protein profile

VK055_4360

L-fuculose phosphate aldolase

Genome: KpATCC43816

Gene: fucA AIK82903.1 Structure source: Experimental + ColabFold UniProt A6TD81
Amino acids 215
Annotations 3
Features 15
PDB binders 2
Druggability 0.703

Overview

Basic information about this protein and its source genome.

Accession
VK055_4360
Gene
fucA AIK82903.1
Status
annotated
Amino acids
215
Structure source
Experimental + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
30.556
Localization
Cytoplasmic
ColabFold pLDDT
95.5

Selected Druggability evidence

PDB experimental structure

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.703
Structure 7X78
Pocket Pocket 3
P2Rank
Structure 7X78
Pocket No pockets
ColabFold model
FPocket 0.336 · Pocket 1
P2Rank 0.096 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 60 / 4744 genomes with a hit
Normalized 0.013

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

3 GO

Gene Ontology (GO)

3
  • GO:0008270 Binding to a zinc ion (Zn).
  • GO:0006004 The chemical reactions and pathways involving fucose, or 6-deoxygalactose, which has two enantiomers, D-fucose and L-fucose.
  • GO:0008738 Catalysis of the reaction: L-fuculose 1-phosphate = (S)-lactaldehyde + glycerone phosphate.

Sequence Features

Domain/signature hits from InterPro and related databases.

15 records
Show feature table
Start End DB Term Name
1 215 Hamap MF_00987 L-fuculose phosphate aldolase [fucA].
1 215 InterPro IPR004782 L-fucose phosphate aldolase
2 212 PANTHER PTHR22789 FUCULOSE PHOSPHATE ALDOLASE
1 215 Gene3D G3DSA:3.40.225.10 -
1 215 InterPro IPR036409 Class II aldolase/adducin N-terminal domain superfamily
1 212 SUPERFAMILY SSF53639 AraD/HMP-PK domain-like
1 212 InterPro IPR036409 Class II aldolase/adducin N-terminal domain superfamily
4 207 CDD cd00398 Aldolase_II
8 182 SMART SM01007 Aldolase_II_2
8 182 InterPro IPR001303 Class II aldolase/adducin N-terminal
2 215 NCBIfam TIGR01086 L-fuculose-phosphate aldolase
2 215 InterPro IPR004782 L-fucose phosphate aldolase
1 215 FunFam G3DSA:3.40.225.10:FF:000005 L-fuculose phosphate aldolase
9 182 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain
9 182 InterPro IPR001303 Class II aldolase/adducin N-terminal

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

1 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
PDB 7X78
X-ray 20.00 Å - Viewing
ColabFold VK055_4360
ColabFold full sequence Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
3 0.703
9 0.266

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

2 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
13P P0AB87 170.1 Da LogP -1.34 TPSA 104.1 ✓ Ro5 ✓ Clean C(C(=O)COP(=O)(O)O)O
PGH P0AB87 171.0 Da LogP -1.40 TPSA 116.1 ✓ Ro5 ✓ Clean C(C(=O)NO)OP(=O)(O)O

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.