Protein profile

VK055_4366

pyridine nucleotide-disulfide oxidoreductase family protein

Genome: KpATCC43816

Gene: AIK82909.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GUJ1
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Amino acids 465
Annotations 0
Features 11
PDB binders 0
Druggability 0.974

Overview

Basic information about this protein and its source genome.

Accession
VK055_4366
Assembly
Klebsiella pneumoniae subsp. pneumoniae strain ATCC 43816 KPPR1, complete genome
Gene
AIK82909.1
Status
annotated
Amino acids
465
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
Unknown
ColabFold pLDDT
93.89

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.974
Structure A0A0H3GUJ1
Pocket Pocket 1
P2Rank 0.991
Structure A0A0H3GUJ1
Pocket Pocket 1
ColabFold model
FPocket 0.919 · Pocket 3
P2Rank 0.981 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 19 / 4744 genomes with a hit
Normalized 0.004

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

11 records
Show feature table
Start End DB Term Name
2 225 SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain
2 225 InterPro IPR036188 FAD/NAD(P)-binding domain superfamily
1 41 Gene3D G3DSA:3.50.50.100 -
78 416 Gene3D G3DSA:3.50.50.60 -
78 416 InterPro IPR036188 FAD/NAD(P)-binding domain superfamily
6 28 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature
433 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature
193 218 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature
2 451 PANTHER PTHR40254 BLR0577 PROTEIN
8 157 Pfam PF13454 FAD-NAD(P)-binding
8 157 InterPro IPR038732 FAD-dependent urate hydroxylase HpyO/Asp monooxygenase CreE-like, FAD/NAD(P)-binding domain

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GUJ1
AlphaFold — — full sequence — Viewing
ColabFold VK055_4366
ColabFold — — full sequence — Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.974

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 50.13 0.98
2 26.91 0.917