Protein profile
HT085_RS00175
1-deoxy-D-xylulose-5-phosphate synthase
Genome: NZ_AP023069.1
Overview
Basic information about this protein and its source genome.
- Accession
- HT085_RS00175
- Gene
- TUM19854C_00310 E8M63_03350 dxs
- Status
- annotated
- Amino acids
- 637
- Structure source
- AlphaFold
Target profile
Computed evidence for target prioritization.
- Human off-target
- hit
- Gut microbiome off-target
- hit
- Essential (DEG)
- Y
- Localization
- Cytoplasmic
Selected Druggability evidence
Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.
Sequence
Primary amino-acid sequence viewer.
Functional Annotations
Enzyme classification and Gene Ontology terms linked to this protein.
Enzyme Commission (EC)
1Gene Ontology (GO)
7- GO:0016114 The chemical reactions and pathways resulting in the formation of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.
- GO:0008661 Catalysis of the reaction: D-glyceraldehyde 3-phosphate + H+ + pyruvate = 1-deoxy-D-xylulose 5-phosphate + CO2.
- GO:0005829 The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
- GO:0000287 Binding to a magnesium (Mg) ion.
- GO:0030976 Binding to thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases.
- GO:0019288 The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.
- GO:0009228 The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.
Sequence Features
Domain/signature hits from InterPro and related databases.
Show feature table
| Start | End | DB | Term | Name |
|---|---|---|---|---|
| 329 | 489 | Pfam | PF02779 | Transketolase, pyrimidine binding domain |
| 329 | 489 | InterPro | IPR005475 | Transketolase-like, pyrimidine-binding domain |
| 43 | 294 | CDD | cd02007 | TPP_DXS |
| 43 | 294 | InterPro | IPR005477 | Deoxyxylulose-5-phosphate synthase |
| 225 | 245 | Coils | Coil | Coil |
| 329 | 515 | SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) |
| 329 | 515 | InterPro | IPR029061 | Thiamin diphosphate-binding fold |
| 7 | 288 | Pfam | PF13292 | 1-deoxy-D-xylulose-5-phosphate synthase |
| 7 | 288 | InterPro | IPR005477 | Deoxyxylulose-5-phosphate synthase |
| 334 | 488 | CDD | cd07033 | TPP_PYR_DXS_TK_like |
| 9 | 630 | NCBIfam | TIGR00204 | 1-deoxy-D-xylulose-5-phosphate synthase |
| 9 | 630 | InterPro | IPR005477 | Deoxyxylulose-5-phosphate synthase |
| 506 | 631 | FunFam | G3DSA:3.40.50.920:FF:000002 | 1-deoxy-D-xylulose-5-phosphate synthase |
| 4 | 392 | SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) |
| 4 | 392 | InterPro | IPR029061 | Thiamin diphosphate-binding fold |
| 506 | 631 | Gene3D | G3DSA:3.40.50.920 | - |
| 506 | 631 | InterPro | IPR009014 | Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II |
| 1 | 297 | Gene3D | G3DSA:3.40.50.970 | - |
| 6 | 631 | Hamap | MF_00315 | 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. |
| 6 | 631 | InterPro | IPR005477 | Deoxyxylulose-5-phosphate synthase |
| 32 | 51 | ProSitePatterns | PS00801 | Transketolase signature 1. |
| 32 | 51 | InterPro | IPR005474 | Transketolase, N-terminal |
| 436 | 452 | ProSitePatterns | PS00802 | Transketolase signature 2. |
| 436 | 452 | InterPro | IPR020826 | Transketolase binding site |
| 502 | 630 | SUPERFAMILY | SSF52922 | TK C-terminal domain-like |
| 502 | 630 | InterPro | IPR009014 | Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II |
| 330 | 494 | SMART | SM00861 | Transket_pyr_3 |
| 330 | 494 | InterPro | IPR005475 | Transketolase-like, pyrimidine-binding domain |
| 329 | 498 | Gene3D | G3DSA:3.40.50.970 | - |
| 3 | 633 | PANTHER | PTHR43322 | 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED |
| 3 | 633 | InterPro | IPR005477 | Deoxyxylulose-5-phosphate synthase |
| 329 | 496 | FunFam | G3DSA:3.40.50.970:FF:000005 | 1-deoxy-D-xylulose-5-phosphate synthase |
| 506 | 622 | Pfam | PF02780 | Transketolase, C-terminal domain |
| 506 | 622 | InterPro | IPR033248 | Transketolase, C-terminal domain |
3D Structure
Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.
Loading 3D structure...
Structural evidence
0 + 1Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.
| Entry | Method | Resolution | Chain | Coverage | Links | Status |
|---|---|---|---|---|---|---|
|
AlphaFold
HT085_RS00175
|
AlphaFold | — | — | full sequence | — | Viewing |
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer
Pockets (FPOCKET)
Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).
| FPOCKET | Sticks | Spheres | Surfaces | Druggability | Labels | Zoom | Positions |
|---|---|---|---|---|---|---|---|
| 1 | 0.581 | ||||||
| 2 | 0.449 | ||||||
| 3 | 0.211 |
Pockets (P2RANK)
Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).
| P2RANK | Sticks | Spheres | Surfaces | Score | Probability | Labels | Zoom | Positions |
|---|---|---|---|---|---|---|---|---|
| 1 | 57.78 | 0.978 | ||||||
| 2 | 3.76 | 0.117 | ||||||
| 3 | 1.82 | 0.029 | ||||||
| 4 | 1.5 | 0.018 |
Ligand evidence
Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.
Highest-confidence structural evidence: ligands co-crystallized with this exact protein. If the source PDB is loaded in TPW, use Open crystal to inspect it in the structure viewer.
No PDB structure with a co-crystallized ligand found for this exact protein.
Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.
| Ligand | Source crystal | UniProt (homolog) | MW · LogP · TPSA | Lipinski | PAINS | SMILES |
|---|---|---|---|---|---|---|
| 1U0 | P29401 | 483.4 Da LogP 1.12 TPSA 205.5 | 1 viol. | ✓ Clean |
Cc1c(sc(c1Cc2cnc(nc2N)C)[C@@H](CO)O)CCOP(=O)(O)…
|
|
| 1Y7 | P29401 | 292.2 Da LogP -4.11 TPSA 188.1 | 1 viol. | ✓ Clean |
C([C@@H]([C@H]([C@@H]([C@@H]([C@@H](COP(=O)(O)O…
|
|
| COI | P09061 | 130.1 Da LogP 0.69 TPSA 54.4 | ✓ Ro5 | ✓ Clean |
CC(C)CC(=O)C(=O)O
|
|
| DPO | P77488 | 173.9 Da LogP -3.34 TPSA 135.6 | ✓ Ro5 | ✓ Clean |
[O-]P(=O)([O-])OP(=O)([O-])[O-]
|
|
| DX5 | P29401 | 232.1 Da LogP -2.83 TPSA 147.7 | 1 viol. | ✓ Clean |
C([C@@H]([C@H]([C@@H](COP(=O)(O)O)O)O)O)O
|
|
| HTL | Q9RUB5 | 467.4 Da LogP 1.04 TPSA 186.0 | ✓ Ro5 | ✓ Clean |
Cc1c(sc([n+]1Cc2cnc(nc2N)C)C(=O)C)CCO[P@@](=O)(…
|
|
| PYR | P21874 | 88.1 Da LogP -0.34 TPSA 54.4 | ✓ Ro5 | ✓ Clean |
CC(=O)C(=O)O
|
|
| S6P | P29401 | 262.2 Da LogP -3.47 TPSA 167.9 | 1 viol. | ✓ Clean |
C([C@@H]([C@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O)…
|
|
| T6F | P29401 | 685.5 Da LogP -2.79 TPSA 336.9 | 3 viol. | ✓ Clean |
Cc1c(sc([n+]1Cc2cnc(nc2N)C)[C@](CO)([C@H]([C@@H…
|
|
| TDK | Q9RUB5 | 563.4 Da LogP 0.84 TPSA 235.7 | 3 viol. | ✓ Clean |
Cc1c(sc([n+]1Cc2cnc(nc2N)C)[C@@](C)(O)[P@@](=O)…
|
Experimental bioactivity from ChEMBL measured directly on this protein. Score = pchembl (−log Ki/IC₅₀; higher = more potent).
No ChEMBL bioactivity data found for this exact protein.
Bioactivity inferred from similar proteins in ChEMBL. Score = pchembl (−log Ki/IC₅₀; higher = more potent).
| Ligand | UniProt (homolog) | pchembl | MW · LogP · TPSA | Lipinski | PAINS | SMILES |
|---|---|---|---|---|---|---|
| CHEMBL403691 | P29401 | 8.33 | 306.4 Da LogP 1.78 TPSA 69.1 | ✓ Ro5 | ✓ Clean |
CC(=O)OCCc1sc[n+](Cc2ccc(C)nc2N)c1C
|
| CHEMBL255603 | P29401 | 8.15 | 250.3 Da LogP 0.90 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
Cc1c(CCO)sc[n+]1Cc1ccc(N)nc1
|
| CHEMBL271044 | P29401 | 8.08 | 278.4 Da LogP 1.52 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
Cc1cc(C)c(C[n+]2csc(CCO)c2C)c(N)n1
|
| CHEMBL256627 | P29401 | 8.06 | 278.4 Da LogP 1.47 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
CCc1ccc(C[n+]2csc(CCO)c2C)c(N)n1
|
| CHEMBL270613 | P29401 | 8.05 | 284.8 Da LogP 1.56 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
Cc1c(CCO)sc[n+]1Cc1ccc(Cl)nc1N
|
| CHEMBL401948 | P29401 | 8.05 | 320.2 Da LogP -1.44 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
Cc1c(CCO)sc[n+]1Cc1ccc(Cl)nc1N.[Cl-]
|
| 0YN | P29401 | 7.92 | 263.4 Da LogP 1.86 TPSA 72.0 | ✓ Ro5 | ✓ Clean |
Cc1c(csc1CCO)Cc2cnc(nc2N)C
|
| TZD | P29401 | 7.80 | 440.3 Da LogP 0.72 TPSA 187.1 | ✓ Ro5 | ✓ Clean |
Cc1ncc(c(n1)N)CN2C(=C(SC2=O)CCO[P@@](=O)(O)OP(=…
|
| CHEMBL252086 | P29401 | 7.75 | 299.8 Da LogP -1.78 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
Cc1ccc(C[n+]2csc(CCO)c2C)c(N)n1.[Cl-]
|
| CHEMBL403212 | P29401 | 7.68 | 292.4 Da LogP 1.78 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
CCc1sc(CCO)c(C)[n+]1Cc1ccc(C)nc1N
|
| CHEMBL401817 | P29401 | 7.66 | 424.3 Da LogP 1.45 TPSA 156.1 | ✓ Ro5 | ✓ Clean |
Cc1ccc(C[n+]2csc(CCOP(=O)(O)OP(=O)(O)O)c2C)c(N)…
|
| CHEMBL256831 | P29401 | 7.64 | 307.4 Da LogP 0.86 TPSA 92.1 | ✓ Ro5 | ✓ Clean |
CC(=O)Nc1ccc(C[n+]2csc(CCO)c2C)c(N)n1
|
| CHEMBL402329 | P29401 | 7.60 | 278.4 Da LogP 1.52 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
Cc1ccc(C[n+]2c(C)sc(CCO)c2C)c(N)n1
|
| CHEMBL402566 | P29401 | 7.60 | 280.4 Da LogP 0.40 TPSA 83.2 | ✓ Ro5 | ✓ Clean |
Cc1ccc(C[n+]2csc(CCO)c2CO)c(N)n1
|
| CHEMBL255340 | P29401 | 7.57 | 280.4 Da LogP 0.70 TPSA 83.2 | ✓ Ro5 | ✓ Clean |
Cc1ccc(C[n+]2csc([C@@H](O)CO)c2C)c(N)n1
|
| CHEMBL252441 | P29401 | 7.55 | 313.9 Da LogP -1.47 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
Cc1ccc(C[n+]2c(C)sc(CCO)c2C)c(N)n1.[Cl-]
|
| CHEMBL258077 | P29401 | 7.55 | 280.4 Da LogP 0.70 TPSA 83.2 | ✓ Ro5 | ✓ Clean |
Cc1ccc(C[n+]2csc([C@H](O)CO)c2C)c(N)n1
|
| CHEMBL256454 | P29401 | 7.54 | 250.3 Da LogP 0.90 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
Cc1ccc(C[n+]2csc(CCO)c2)c(N)n1
|
| CHEMBL255339 | P29401 | 7.52 | 308.4 Da LogP 1.27 TPSA 83.2 | ✓ Ro5 | ✓ Clean |
Cc1ccc(C[n+]2c(C(C)O)sc(CCO)c2C)c(N)n1
|
| CHEMBL270632 | P29401 | 7.44 | 264.4 Da LogP 1.21 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
Cc1ccc(C[n+]2cc(CCO)sc2C)c(N)n1
|
| CHEMBL403365 | P29401 | 7.44 | 250.3 Da LogP 0.90 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
Cc1c(CCO)sc[n+]1Cc1cccnc1N
|
| CHEMBL255541 | P29401 | 7.40 | 278.4 Da LogP 1.47 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
CCc1c(CCO)sc[n+]1Cc1ccc(C)nc1N
|
| CHEMBL255542 | P29401 | 7.28 | 280.4 Da LogP 0.70 TPSA 83.2 | ✓ Ro5 | ✓ Clean |
Cc1ccc(C[n+]2csc(C(O)CO)c2C)c(N)n1
|
| CHEMBL429246 | P29401 | 7.24 | 275.4 Da LogP 0.78 TPSA 86.8 | ✓ Ro5 | ✓ Clean |
Cc1c(CCO)sc[n+]1Cc1ccc(C#N)nc1N
|
| CHEMBL271521 | P29401 | 7.19 | 250.3 Da LogP 0.90 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
Cc1c(CCO)sc[n+]1Cc1cnccc1N
|
| CHEMBL270168 | P29401 | 6.98 | 318.3 Da LogP 1.92 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
Cc1c(CCO)sc[n+]1Cc1ccc(C(F)(F)F)nc1N
|
| CHEMBL252637 | P29401 | 6.96 | 285.8 Da LogP -2.09 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
Cc1c(CCO)sc[n+]1Cc1cccnc1N.[Cl-]
|
| CHEMBL270384 | P29401 | 6.96 | 376.2 Da LogP 1.51 TPSA 63.0 | ✓ Ro5 | ✓ Clean |
Cc1c(CCO)sc[n+]1Cc1cc(I)cnc1N
|
| CHEMBL2104121 | Q9RUB5 | 6.94 | 460.8 Da LogP -2.15 TPSA 169.0 | ✓ Ro5 | ✓ Clean |
Cc1ncc(C[n+]2csc(CCOP(=O)(O)OP(=O)(O)O)c2C)c(N)…
|
| CHEMBL430409 | P29401 | 6.77 | 423.3 Da LogP 1.56 TPSA 148.7 | ✓ Ro5 | ✓ Clean |
Cc1ncc(C[n+]2csc(CCOP(C)(=O)OP(=O)(O)O)c2C)c(N)…
|
Proposed virtual-screening candidates from ZINC. Score = Tanimoto similarity to a known binder (0–1; higher = more similar).
| Ligand | Tanimoto | MW · LogP · TPSA | Lipinski | PAINS | SMILES |
|---|---|---|---|---|---|
| ZINC8215517 | 0.981 | 425.3 Da LogP 0.84 TPSA 169.0 | ✓ Ro5 | ✓ Clean |
Cc1ncc(C[n+]2csc(CCO[P@@](=O)(O)OP(=O)(O)O)c2C)…
|
| ZINC2516111 | 0.958 | 262.2 Da LogP -3.47 TPSA 167.9 | 1 viol. | ✓ Clean |
O=P(O)(O)OC[C@@H](O)[C@@H](O)[C@H](O)[C@@H](O)CO
|
| ZINC2522704 | 0.958 | 262.2 Da LogP -3.47 TPSA 167.9 | 1 viol. | ✓ Clean |
O=P(O)(O)OC[C@H](O)[C@H](O)[C@@H](O)[C@@H](O)CO
|
| ZINC3869812 | 0.958 | 262.2 Da LogP -3.47 TPSA 167.9 | 1 viol. | ✓ Clean |
O=P(O)(O)OC[C@@H](O)[C@@H](O)[C@H](O)[C@H](O)CO
|
| ZINC1532839 | 0.852 | 345.3 Da LogP 0.72 TPSA 122.4 | ✓ Ro5 | ✓ Clean |
Cc1ncc(C[n+]2csc(CCOP(=O)(O)O)c2C)c(N)n1
|
| ZINC13520374 | 0.807 | 426.3 Da LogP 0.97 TPSA 163.2 | ✓ Ro5 | ✓ Clean |
Cc1ncc(C[n+]2csc(CCO[P@@](=O)(O)OP(=O)(O)O)c2C)…
|
| ZINC5975509 | 0.731 | 202.1 Da LogP -2.19 TPSA 127.5 | ✓ Ro5 | ✓ Clean |
O=P(O)(O)OC[C@H](O)[C@H](O)CO
|
| ZINC5159740 | 0.690 | 307.4 Da LogP 1.18 TPSA 82.0 | ✓ Ro5 | ✓ Clean |
CC(=O)OCCc1sc[n+](Cc2cnc(C)nc2N)c1C
|
| ZINC1569986051 | 0.672 | 324.5 Da LogP 1.50 TPSA 88.8 | ✓ Ro5 | ✓ Clean |
Cc1ncc(C[n+]2csc(CCOC(=N)S)c2C)c(N)n1
|
| ZINC65748831 | 0.667 | 345.4 Da LogP 0.43 TPSA 119.3 | ✓ Ro5 | ✓ Clean |
Cc1ncc(C[n+]2csc(CCOS(=O)(=O)O)c2C)c(N)n1
|
| ZINC49153 | 0.643 | 265.4 Da LogP 0.61 TPSA 75.9 | ✓ Ro5 | ✓ Clean |
Cc1ncc(C[n+]2csc(CCO)c2C)c(N)n1
|
| ZINC167956596 | 0.625 | 281.4 Da LogP 1.55 TPSA 55.7 | ✓ Ro5 | ✓ Clean |
Cc1ncc(C[n+]2csc(CCS)c2C)c(N)n1
|
| ZINC3209500 | 0.625 | 369.5 Da LogP 2.47 TPSA 82.0 | ✓ Ro5 | ✓ Clean |
Cc1ncc(C[n+]2csc(CCOC(=O)c3ccccc3)c2C)c(N)n1
|
| ZINC5132038 | 0.625 | 290.2 Da LogP -3.90 TPSA 185.0 | 1 viol. | ✓ Clean |
O=C(CO)[C@@H](O)[C@H](O)[C@H](O)[C@H](O)COP(=O)…
|
| ZINC100033330 | 0.613 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C[C@H](O)[C@@H](O)[C@@H](O)[C@H](O)COP(=O)(O)O
|
| ZINC100067275 | 0.613 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C[C@H](O)[C@H](O)[C@H](O)[C@H](O)COP(=O)(O)O
|
| ZINC100889630 | 0.613 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C[C@H](O)[C@H](O)[C@@H](O)[C@@H](O)COP(=O)(O)O
|
| ZINC104861723 | 0.613 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C[C@@H](O)[C@H](O)[C@@H](O)[C@@H](O)COP(=O)(O…
|
| ZINC12501558 | 0.613 | 276.1 Da LogP -3.38 TPSA 185.0 | 1 viol. | ✓ Clean |
O=C(O)[C@H](O)[C@H](O)[C@H](O)[C@@H](O)COP(=O)(…
|
| ZINC12501560 | 0.613 | 276.1 Da LogP -3.38 TPSA 185.0 | 1 viol. | ✓ Clean |
O=C(O)[C@H](O)[C@H](O)[C@H](O)[C@H](O)COP(=O)(O…
|
| ZINC12501562 | 0.613 | 276.1 Da LogP -3.38 TPSA 185.0 | 1 viol. | ✓ Clean |
O=C(O)[C@H](O)[C@H](O)[C@@H](O)[C@@H](O)COP(=O)…
|
| ZINC12501564 | 0.613 | 276.1 Da LogP -3.38 TPSA 185.0 | 1 viol. | ✓ Clean |
O=C(O)[C@H](O)[C@H](O)[C@@H](O)[C@H](O)COP(=O)(…
|
| ZINC12503760 | 0.613 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C[C@H](O)[C@H](O)[C@H](O)[C@@H](O)COP(=O)(O)O
|
| ZINC12503763 | 0.613 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C[C@H](O)[C@H](O)[C@@H](O)[C@H](O)COP(=O)(O)O
|
| ZINC1532623 | 0.613 | 276.1 Da LogP -3.38 TPSA 185.0 | 1 viol. | ✓ Clean |
O=C(O)[C@H](O)[C@@H](O)[C@H](O)[C@H](O)COP(=O)(…
|
| ZINC19850142 | 0.613 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C[C@H](O)[C@@H](O)[C@H](O)[C@H](O)COP(=O)(O)O
|
| ZINC2047359 | 0.613 | 276.1 Da LogP -3.38 TPSA 185.0 | 1 viol. | ✓ Clean |
O=C(O)[C@@H](O)[C@@H](O)[C@H](O)[C@@H](O)COP(=O…
|
| ZINC2508229 | 0.613 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C[C@@H](O)[C@@H](O)[C@H](O)[C@H](O)COP(=O)(O)O
|
| ZINC2545091 | 0.613 | 276.1 Da LogP -3.38 TPSA 185.0 | 1 viol. | ✓ Clean |
O=C(O)[C@@H](O)[C@H](O)[C@@H](O)[C@@H](O)COP(=O…
|
| ZINC3869602 | 0.613 | 276.1 Da LogP -3.38 TPSA 185.0 | 1 viol. | ✓ Clean |
O=C(O)[C@@H](O)[C@@H](O)[C@@H](O)[C@@H](O)COP(=…
|
| ZINC3869603 | 0.613 | 276.1 Da LogP -3.38 TPSA 185.0 | 1 viol. | ✓ Clean |
O=C(O)[C@@H](O)[C@@H](O)[C@@H](O)[C@H](O)COP(=O…
|
| ZINC3869604 | 0.613 | 276.1 Da LogP -3.38 TPSA 185.0 | 1 viol. | ✓ Clean |
O=C(O)[C@@H](O)[C@@H](O)[C@H](O)[C@H](O)COP(=O)…
|
| ZINC4545927 | 0.613 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C[C@@H](O)[C@@H](O)[C@@H](O)[C@@H](O)COP(=O)(…
|
| ZINC4545928 | 0.613 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C[C@@H](O)[C@@H](O)[C@@H](O)[C@H](O)COP(=O)(O…
|
| ZINC4545929 | 0.613 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C[C@@H](O)[C@@H](O)[C@H](O)[C@@H](O)COP(=O)(O…
|
| ZINC100065511 | 0.594 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C(CO)[C@H](O)[C@H](O)[C@@H](O)COP(=O)(O)O
|
| ZINC100085043 | 0.594 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C(CO)[C@H](O)[C@H](O)[C@H](O)COP(=O)(O)O
|
| ZINC100657408 | 0.594 | 259.2 Da LogP -3.30 TPSA 170.5 | 1 viol. | ✓ Clean |
N[C@H](C=O)[C@H](O)[C@H](O)[C@H](O)COP(=O)(O)O
|
| ZINC104869937 | 0.594 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C(CO)[C@H](O)[C@@H](O)[C@@H](O)COP(=O)(O)O
|
| ZINC13537943 | 0.594 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C(CO)[C@H](O)[C@@H](O)[C@H](O)COP(=O)(O)O
|
| ZINC215934438 | 0.594 | 259.2 Da LogP -3.30 TPSA 170.5 | 1 viol. | ✓ Clean |
N[C@H](C=O)[C@H](O)[C@@H](O)[C@@H](O)COP(=O)(O)O
|
| ZINC255961849 | 0.594 | 259.2 Da LogP -3.30 TPSA 170.5 | 1 viol. | ✓ Clean |
N[C@H](C=O)[C@H](O)[C@H](O)[C@@H](O)COP(=O)(O)O
|
| ZINC255961850 | 0.594 | 259.2 Da LogP -3.30 TPSA 170.5 | 1 viol. | ✓ Clean |
N[C@H](C=O)[C@H](O)[C@@H](O)[C@H](O)COP(=O)(O)O
|
| ZINC5132021 | 0.594 | 259.2 Da LogP -3.30 TPSA 170.5 | 1 viol. | ✓ Clean |
N[C@@H](C=O)[C@@H](O)[C@H](O)[C@H](O)COP(=O)(O)O
|
| ZINC85994845 | 0.594 | 260.1 Da LogP -3.26 TPSA 164.8 | 1 viol. | ✓ Clean |
O=C(CO)[C@@H](O)[C@H](O)[C@H](O)COP(=O)(O)O
|
| ZINC13540298 | 0.591 | 440.3 Da LogP 0.72 TPSA 187.1 | ✓ Ro5 | ✓ Clean |
Cc1ncc(Cn2c(C)c(CCO[P@@](=O)(O)OP(=O)(O)O)sc2=O…
|
| ZINC1497913 | 0.588 | 427.6 Da LogP 3.23 TPSA 82.0 | ✓ Ro5 | ✓ Clean |
Cc1ncc(C[n+]2csc(CCOC(=O)C3C4CC5CC(C4)CC3C5)c2C…
|
| ZINC8398853 | 0.588 | 441.6 Da LogP 3.77 TPSA 82.0 | ✓ Ro5 | ✓ Clean |
Cc1ncc(C[n+]2csc(CCOC(=O)CC34CC5CC(CC(C5)C3)C4)…
|
| ZINC1530556 | 0.581 | 230.1 Da LogP -2.62 TPSA 144.5 | ✓ Ro5 | ✓ Clean |
O=C[C@H](O)[C@@H](O)[C@H](O)COP(=O)(O)O
|
| ZINC8551307 | 0.581 | 230.1 Da LogP -2.62 TPSA 144.5 | ✓ Ro5 | ✓ Clean |
O=C[C@H](O)[C@H](O)[C@@H](O)COP(=O)(O)O
|
PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.