Protein profile

PA0048

transcriptional regulator

Genome: NC_002516.2

Gene: PA0048 Structure source: AlphaFold UniProt Q9I784

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Amino acids 127

Annotations 1

Features 13

PDB binders 0

Overview

Basic information about this protein and its source genome.

Accession: PA0048
Assembly: Pseudomonas aeruginosa PAO1, complete genome
Gene: PA0048
Status: annotated
Amino acids: 127
Structure source: AlphaFold

GO:0003677 Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

Target profile

Computed evidence for target prioritization.

Human off-target: No hit
Gut microbiome off-target: hit
Essential (DEG): N
Localization: Unknown

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 GO

Gene Ontology (GO)

GO:0003677 Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

Sequence Features

Domain/signature hits from InterPro and related databases.

13 records

Show feature table

Start	End	DB	Term	Name
1	75	Gene3D	G3DSA:1.10.260.40	-
1	75	InterPro	IPR010982	Lambda repressor-like, DNA-binding domain superfamily
3	69	PANTHER	PTHR46797	HTH-TYPE TRANSCRIPTIONAL REGULATOR
9	61	Pfam	PF01381	Helix-turn-helix
9	61	InterPro	IPR001387	Cro/C1-type helix-turn-helix domain
7	61	ProSiteProfiles	PS50943	Cro/C1-type HTH domain profile.
7	61	InterPro	IPR001387	Cro/C1-type helix-turn-helix domain
4	61	CDD	cd00093	HTH_XRE
4	61	InterPro	IPR001387	Cro/C1-type helix-turn-helix domain
6	61	SMART	SM00530	mbf_short4
6	61	InterPro	IPR001387	Cro/C1-type helix-turn-helix domain
1	65	SUPERFAMILY	SSF47413	lambda repressor-like DNA-binding domains
1	65	InterPro	IPR010982	Lambda repressor-like, DNA-binding domain superfamily

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

No pockets are loaded yet for the displayed AlphaFold model PA0048 structure. Run experimental pocket backfill to show FPocket/P2Rank overlays on this structure.

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry	Method	Resolution	Chain	Coverage	Links	Status
AlphaFold PA0048	AlphaFold	—	—	full sequence	—	Viewing