Protein profile

PA0087

hypothetical protein

Genome: NC_002516.2

Gene: tssE1 PA0087 Structure source: AlphaFold UniProt Q9I745
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Amino acids 169
Annotations 1
Features 6
PDB binders 0
Druggability 0.613

Overview

Basic information about this protein and its source genome.

Accession
PA0087
Assembly
Pseudomonas aeruginosa PAO1, complete genome
Gene
tssE1 PA0087
Status
annotated
Amino acids
169
Structure source
AlphaFold
GO
GO:0005737 The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Unknown

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.613
Structure –
Pocket –

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 GO

Gene Ontology (GO)

1
  • GO:0005737 The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Sequence Features

Domain/signature hits from InterPro and related databases.

6 records
Show feature table
Start End DB Term Name
1 161 PANTHER PTHR38595 CYTOPLASMIC PROTEIN-RELATED
39 152 SUPERFAMILY SSF160719 gpW/gp25-like
11 161 NCBIfam TIGR03357 type VI secretion system baseplate subunit TssE
11 161 InterPro IPR017737 Type VI secretion system protein TssE1-like
39 141 Pfam PF04965 Baseplate wedge protein gp25
39 141 InterPro IPR007048 IraD/Gp25-like

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA0087
AlphaFold — — full sequence — Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
2 0.613
3 0.494