Protein profile

PA0088

hypothetical protein

Genome: NC_002516.2

Gene: PA0088 tssF1 Structure source: AlphaFold UniProt Q9I744
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Amino acids 619
Annotations 0
Features 7
PDB binders 0
Druggability 0.85

Overview

Basic information about this protein and its source genome.

Accession
PA0088
Assembly
Pseudomonas aeruginosa PAO1, complete genome
Gene
PA0088 tssF1
Status
annotated
Amino acids
619
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
Y
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.85
Structure –
Pocket –

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

7 records
Show feature table
Start End DB Term Name
1 619 PANTHER PTHR35370 CYTOPLASMIC PROTEIN-RELATED-RELATED
1 616 Pfam PF05947 Type VI secretion system, TssF
1 616 InterPro IPR010272 Type VI secretion system TssF
5 618 NCBIfam TIGR03359 type VI secretion system baseplate subunit TssF
5 618 InterPro IPR010272 Type VI secretion system TssF
1 619 PIRSF PIRSF028304 UCP028304
1 619 InterPro IPR010272 Type VI secretion system TssF

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA0088
AlphaFold — — full sequence — Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
3 0.85