Protein profile

PA0242

hypothetical protein

Genome: NC_002516.2

Gene: quiC1 PA0242 Structure source: AlphaFold UniProt Q9I6P6
Amino acids 634
Annotations 6
Features 24
PDB binders 3
Druggability 0.763

Overview

Basic information about this protein and its source genome.

Accession
PA0242
Gene
quiC1 PA0242
Status
annotated
Amino acids
634
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
27.523
Human E-value
1.29e-06
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.763
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

MQRSIATVSLSGTLPEKLEAIAAAGFDGVEIFENDLLHYDGSPRDVRRLCADLGLEILLFQPFRDFEGCRRERLGRNLERAERKFDLMQELGTDLVLVCSNVAADALGEPALLADDLRQLAERAAVRGLRIGYEALAWGRQVNTWEQAWDLVRRADQANLGLILDSFHTLSLDGDPRGIADLPGEKIFFVQMADAPLLAMDVLEWSRHFRCFPGQGGFDLAGFLAPVVASGYRGPLSLEVFNDGFRAAPTRANAVDGLRSLLYLEEKTREHLQRQTPHVAVDELFAPPPASLCDGIEFLEFAVDETLGARLGQWLQRLGFARAGEHRSKNVSLLRQGDINLVLNAEPYSFAHGFFEAHGPSLCATALCVRDAGQALERARAYGGQPYRGLLGPNEREIPAVRALDGSLLYLVERHTEGRSIYDSDFVTNDADTSGLGLRRVDHVALALPAEGLDSWVLFYKSLFDFGADDEVVLPDPYGLVTSRAVRSPCGSVRLPLNISEDRNTAIARSLSSYRGSGVHHIAFDCADIFAAVAQAKEAGVALLEIPLNYYDDLAARFDFDDEFLSELAYYNVLYDRDAQGGELFHVFTEPFEERFFFEILQRRHGYAGYGAANVPVRLAAMAQARRGVRRVKL

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 EC 5 GO

Enzyme Commission (EC)

1

Gene Ontology (GO)

5
  • GO:0046565 Catalysis of the reaction: 3-dehydroshikimate = 3,4-dihydroxybenzoate + H2O. 3,4-dihydroxybenzoate is also known as protocatechuate.
  • GO:0046872 Binding to a metal ion.
  • GO:0046279 The chemical reactions and pathways resulting in the formation of 3,4-dihydroxybenzoate.
  • GO:0019631 The chemical reactions and pathways resulting in the breakdown of quinate, the anion of quinic acid.
  • GO:0019633 The chemical reactions and pathways resulting in the breakdown of shikimate, (3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate, the anion of shikimic acid.

Sequence Features

Domain/signature hits from InterPro and related databases.

24 records
Show feature table
Start End DB Term Name
438 631 Gene3D G3DSA:3.10.180.10 -
438 631 InterPro IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
440 590 ProSiteProfiles PS51819 Vicinal oxygen chelate (VOC) domain profile.
440 590 InterPro IPR037523 Vicinal oxygen chelate (VOC) domain
1 268 Gene3D G3DSA:3.20.20.150 -
292 621 SUPERFAMILY SSF54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
292 621 InterPro IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
1 269 SUPERFAMILY SSF51658 Xylose isomerase-like
1 269 InterPro IPR036237 Xylose isomerase-like superfamily
294 426 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal
290 437 Gene3D G3DSA:3.10.180.10 -
290 437 InterPro IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
1 335 PANTHER PTHR12110 HYDROXYPYRUVATE ISOMERASE
441 565 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
441 565 InterPro IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain
1 627 Hamap MF_02238 3-dehydroshikimate dehydratase.
1 627 InterPro IPR043700 3-dehydroshikimate dehydratase
295 414 ProSiteProfiles PS51819 Vicinal oxygen chelate (VOC) domain profile.
295 414 InterPro IPR037523 Vicinal oxygen chelate (VOC) domain
296 427 CDD cd08342 HPPD_N_like
296 427 InterPro IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal
18 261 Pfam PF01261 Xylose isomerase-like TIM barrel
18 261 InterPro IPR013022 Xylose isomerase-like, TIM barrel domain
71 91 Coils Coil Coil

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA0242
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.703
2 0.596
17 0.259

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

81 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
EMC P80064 229.7 Da LogP 0.97 TPSA 0.0 ✓ Ro5 ✓ Clean CC[Hg+]
HHH O52791 168.1 Da LogP 0.51 TPSA 77.8 ✓ Ro5 ✓ Clean c1cc(ccc1[C@@H](C(=O)O)O)O
RMN Q9Z4X7 152.1 Da LogP 0.80 TPSA 57.5 ✓ Ro5 ✓ Clean c1ccc(cc1)[C@H](C(=O)O)O

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.