Protein profile

PA0308

hypothetical protein

Genome: NC_002516.2

Gene: PA0308 Structure source: AlphaFold UniProt Q9I6I3
Amino acids 339
Annotations 2
Features 13
PDB binders 7
Druggability 0.637

Overview

Basic information about this protein and its source genome.

Accession
PA0308
Gene
PA0308
Status
annotated
Amino acids
339
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
29.075
Human E-value
2.41e-10
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.637
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

2 GO

Gene Ontology (GO)

2
  • GO:0016020 A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
  • GO:0016298 Catalysis of the hydrolysis of a lipid.

Sequence Features

Domain/signature hits from InterPro and related databases.

13 records
Show feature table
Start End DB Term Name
93 323 Pfam PF12146 Serine aminopeptidase, S33
93 323 InterPro IPR022742 Serine aminopeptidase, S33
75 337 Gene3D G3DSA:3.40.50.1820 alpha/beta hydrolase
75 337 InterPro IPR029058 Alpha/Beta hydrolase fold
80 331 PANTHER PTHR11614 PHOSPHOLIPASE-RELATED
79 322 SUPERFAMILY SSF53474 alpha/beta-Hydrolases
79 322 InterPro IPR029058 Alpha/Beta hydrolase fold
171 184 PRINTS PR00111 Alpha/beta hydrolase fold signature
171 184 InterPro IPR000073 Alpha/beta hydrolase fold-1
279 293 PRINTS PR00111 Alpha/beta hydrolase fold signature
279 293 InterPro IPR000073 Alpha/beta hydrolase fold-1
122 137 PRINTS PR00111 Alpha/beta hydrolase fold signature
122 137 InterPro IPR000073 Alpha/beta hydrolase fold-1

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA0308
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.637

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

157 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
9JX Q99685 467.0 Da LogP 4.03 TPSA 56.8 ✓ Ro5 ✓ Clean c1ccc(c(c1)c2cccc(c2)N3C[C@@H](CC3=O)N4CCN(CC4)…
E3A Q99685 384.4 Da LogP 1.86 TPSA 84.7 ✓ Ro5 ✓ Clean c1cc(ccc1n2ccc(n2)C3[C@H]4[C@@H]3CN(C4)C(=O)ON5…
F4P Q99685 383.4 Da LogP 2.93 TPSA 54.3 ✓ Ro5 ✓ Clean c1cc(ccc1C(c2ccc(cc2)F)N3CCN(CC3)C(=O)n4cncn4)F
LDA A0A6I8WFT7 229.4 Da LogP 4.48 TPSA 23.1 ✓ Ro5 ✓ Clean CCCCCCCCCCCC[N+](C)(C)[O-]
XOV Q99685 396.8 Da LogP 2.99 TPSA 67.9 ✓ Ro5 ✓ Clean c1cc(c(cc1F)Cl)OCC2CCN(CC2)C(=O)C3CC4(C3)COC(=O…
XP7 Q99685 382.9 Da LogP 3.16 TPSA 58.6 ✓ Ro5 ✓ Clean c1cc(c(cc1F)Cl)OCC2CCN(CC2)C(=O)CC[C@@H]3CCC(=O…
XPD Q99685 418.9 Da LogP 3.74 TPSA 67.9 ✓ Ro5 ✓ Clean c1cc2c(cc1C(=O)N3CCC(CC3)COc4ccc(cc4Cl)F)NC(=O)…

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.