Protein profile

PA0366

coniferyl aldehyde dehydrogenase

Genome: NC_002516.2

Gene: PA0366 calB Structure source: AlphaFold UniProt Q9I6C8
Amino acids 476
Annotations 7
Features 18
PDB binders 6
Druggability 0.865

Overview

Basic information about this protein and its source genome.

Accession
PA0366
Gene
PA0366 calB
Status
annotated
Amino acids
476
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
47.368
Human E-value
5.36e-22
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.865
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 EC 6 GO

Enzyme Commission (EC)

1

Gene Ontology (GO)

6
  • GO:0005737 The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
  • GO:0004029 Catalysis of the reaction: an aldehyde + H2O + NAD+ = a carboxylate + 2 H+ + NADH.
  • GO:0050269 Catalysis of the reaction: coniferyl aldehyde + H2O + NAD(P)+ = ferulate + NAD(P)H + H+.
  • GO:0006081 The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells.
  • GO:0016491 Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
  • GO:0016620 Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.

Sequence Features

Domain/signature hits from InterPro and related databases.

18 records
Show feature table
Start End DB Term Name
19 448 CDD cd07133 ALDH_CALDH_CalB
228 426 Gene3D G3DSA:3.40.309.10 Aldehyde Dehydrogenase; Chain A, domain 2
228 426 InterPro IPR016163 Aldehyde dehydrogenase, C-terminal
8 28 Coils Coil Coil
228 426 FunFam G3DSA:3.40.309.10:FF:000003 Aldehyde dehydrogenase
26 444 Gene3D G3DSA:3.40.605.10 Aldehyde Dehydrogenase; Chain A, domain 1
26 444 InterPro IPR016162 Aldehyde dehydrogenase, N-terminal
6 476 PIRSF PIRSF036492 ALDH
6 476 InterPro IPR012394 Aldehyde dehydrogenase NAD(P)-dependent
13 472 SUPERFAMILY SSF53720 ALDH-like
13 472 InterPro IPR016161 Aldehyde/histidinol dehydrogenase
26 231 FunFam G3DSA:3.40.605.10:FF:000004 Aldehyde dehydrogenase
17 445 Pfam PF00171 Aldehyde dehydrogenase family
17 445 InterPro IPR015590 Aldehyde dehydrogenase domain
224 231 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site.
224 231 InterPro IPR029510 Aldehyde dehydrogenase, glutamic acid active site
13 472 PANTHER PTHR43570 ALDEHYDE DEHYDROGENASE
13 472 InterPro IPR012394 Aldehyde dehydrogenase NAD(P)-dependent

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA0366
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.865

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

90 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
04T P30838 349.4 Da LogP 2.70 TPSA 118.4 ✓ Ro5 ✓ Clean CC(=O)Nc1ccc(cc1)Nc2ccc(cc2[N+](=O)[O-])S(=O)(=…
1VL P30838 381.4 Da LogP 1.57 TPSA 65.5 ✓ Ro5 ✓ Clean c1ccc2c(c1)[C@@H](C(=O)N2CN3CCN(CC3)Cc4ccc5c(c4…
5OZ G7VCG0 72.1 Da LogP 0.84 TPSA 17.1 ✓ Ro5 ✓ Clean CC(C)C=O
92N C9ZQX6 254.1 Da LogP 1.51 TPSA 55.8 ✓ Ro5 ✓ Clean B1(c2ccc(cc2CO1)Oc3ccc(cc3)C=O)O
B3P A0A0H2X0S3 282.3 Da LogP -4.01 TPSA 145.4 1 viol. ✓ Clean C(CNC(CO)(CO)CO)CNC(CO)(CO)CO
I1E P30838 134.2 Da LogP 2.28 TPSA 17.1 ✓ Ro5 ✓ Clean CCC(=O)c1ccccc1

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.