Protein profile

PA0525

denitrification protein NorD

Genome: NC_002516.2

Gene: PA0525 Structure source: AlphaFold UniProt Q51484
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Amino acids 612
Annotations 1
Features 10
PDB binders 0
Druggability 0.861

Overview

Basic information about this protein and its source genome.

Accession
PA0525
Assembly
Pseudomonas aeruginosa PAO1, complete genome
Gene
PA0525
Status
annotated
Amino acids
612
Structure source
AlphaFold
GO
GO:0005737 The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.861
Structure –
Pocket –

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 GO

Gene Ontology (GO)

1
  • GO:0005737 The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Sequence Features

Domain/signature hits from InterPro and related databases.

10 records
Show feature table
Start End DB Term Name
421 604 SMART SM00327 VWA_4
421 604 InterPro IPR002035 von Willebrand factor, type A
421 610 ProSiteProfiles PS50234 VWFA domain profile.
421 610 InterPro IPR002035 von Willebrand factor, type A
72 611 PANTHER PTHR41248 NORD PROTEIN
431 593 CDD cd01454 vWA_norD_type
422 601 Gene3D G3DSA:3.40.50.410 von Willebrand factor, type A domain
422 601 InterPro IPR036465 von Willebrand factor A-like domain superfamily
424 608 SUPERFAMILY SSF53300 vWA-like
424 608 InterPro IPR036465 von Willebrand factor A-like domain superfamily

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA0525
AlphaFold — — full sequence — Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
2 0.861
14 0.37