Protein profile

PA0620

bacteriophage protein

Genome: NC_002516.2

Gene: HR2 PA0620 Structure source: Experimental + AlphaFold UniProt Q9S576 UniProt G3XD71
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Amino acids 691
Annotations 1
Features 6
PDB binders 0
Druggability 0.846

Overview

Basic information about this protein and its source genome.

Accession
PA0620
Assembly
Pseudomonas aeruginosa PAO1, complete genome
Gene
HR2 PA0620
Status
annotated
Amino acids
691
Structure source
Experimental + AlphaFold
GO
GO:0046872 Binding to a metal ion.

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Extracellular

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.846
Structure –
Pocket –

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 GO

Gene Ontology (GO)

1

Sequence Features

Domain/signature hits from InterPro and related databases.

6 records
Show feature table
Start End DB Term Name
7 158 Pfam PF12571 Phage tail-collar fibre protein
7 158 InterPro IPR022225 Phage tail fibre protein
1 690 PANTHER PTHR35191 PROPHAGE SIDE TAIL FIBER PROTEIN HOMOLOG STFQ-RELATED
360 440 CDD cd19958 pyocin_knob
600 690 Gene3D G3DSA:2.60.40.3940 -
451 529 CDD cd19958 pyocin_knob

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

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Structural evidence

3 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
PDB 6CL6
X-ray 1.90 Å A,B,C,D,E,F
53.4% 323-691
PDBe RCSB PDBj File
Viewing
PDB 6CU2
X-ray 2.58 Å A
36.0% 443-691
PDBe RCSB PDBj File
Loaded
PDB 6CT8
X-ray 2.62 Å A
36.0% 443-691
PDBe RCSB PDBj File
Loaded
AlphaFold PA0620
AlphaFold — — full sequence — Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
2 0.846
1 0.419

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 1.38 0.017