Overview
Basic information about this protein and its source genome.
- Accession
- PA1058
- Gene
- PA1058
- Status
- annotated
- Amino acids
- 89
- Structure source
- AlphaFold
Target profile
Computed evidence for target prioritization.
- Human off-target
- No hit
- Gut microbiome off-target
- hit
- Essential (DEG)
- Y
- Localization
- CytoplasmicMembrane
Sequence
Primary amino-acid sequence viewer.
Functional Annotations
Enzyme classification and Gene Ontology terms linked to this protein.
Gene Ontology (GO)
6- GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
- GO:0015385 Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out).
- GO:0035725 A process in which a sodium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
- GO:0016020 A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
- GO:0015075 Enables the transfer of an ion from one side of a membrane to the other.
- GO:0034220 A process in which a monoatomic ion is transported across a membrane. Monatomic ions (also called simple ions) are ions consisting of exactly one atom.
Sequence Features
Domain/signature hits from InterPro and related databases.
Show feature table
| Start | End | DB | Term | Name |
|---|---|---|---|---|
| 1 | 7 | Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. |
| 20 | 24 | Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. |
| 34 | 53 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. |
| 1 | 24 | Phobius | SIGNAL_PEPTIDE | Signal peptide region |
| 3 | 89 | PANTHER | PTHR34702 | NA(+)/H(+) ANTIPORTER SUBUNIT F1 |
| 3 | 89 | InterPro | IPR007208 | Na(+)/H(+) antiporter subunit F-like |
| 2 | 24 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. |
| 34 | 53 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. |
| 60 | 83 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. |
| 60 | 79 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. |
| 54 | 59 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. |
| 25 | 33 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. |
| 31 | 82 | Pfam | PF04066 | Multiple resistance and pH regulation protein F (MrpF / PhaF) |
| 31 | 82 | InterPro | IPR007208 | Na(+)/H(+) antiporter subunit F-like |
| 1 | 89 | PIRSF | PIRSF028784 | MrpF |
| 1 | 89 | InterPro | IPR007208 | Na(+)/H(+) antiporter subunit F-like |
| 8 | 19 | Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. |
| 84 | 89 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. |
3D Structure
Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.
No pockets are loaded yet for the displayed AlphaFold model PA1058 structure. Run experimental pocket backfill to show FPocket/P2Rank overlays on this structure.
Loading 3D structure...
Structural evidence
0 + 1Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.
| Entry | Method | Resolution | Chain | Coverage | Links | Status |
|---|---|---|---|---|---|---|
|
AlphaFold
PA1058
|
AlphaFold | — | — | full sequence | — | Viewing |
Ligand evidence
Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.
Highest-confidence structural evidence: ligands co-crystallized with this exact protein. If the source PDB is loaded in TPW, use Open crystal to inspect it in the structure viewer.
No PDB structure with a co-crystallized ligand found for this exact protein.
Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.
| Ligand | Source crystal | UniProt (homolog) | MW · LogP · TPSA | Lipinski | PAINS | SMILES |
|---|---|---|---|---|---|---|
| PTY | B7GL96 | 734.1 Da LogP 11.67 TPSA 134.4 | 2 viol. | ✓ Clean |
CCCCCCCCCCCCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCCCCC…
|
Experimental bioactivity from ChEMBL measured directly on this protein. Score = pchembl (−log Ki/IC₅₀; higher = more potent).
No ChEMBL bioactivity data found for this exact protein.
Bioactivity inferred from similar proteins in ChEMBL. Score = pchembl (−log Ki/IC₅₀; higher = more potent).
No ChEMBL hits found through similar proteins.
Proposed virtual-screening candidates from ZINC. Score = Tanimoto similarity to a known binder (0–1; higher = more similar).
| Ligand | Tanimoto | MW · LogP · TPSA | Lipinski | PAINS | SMILES |
|---|---|---|---|---|---|
| ZINC102190506 | 1.000 | 467.5 Da LogP 4.25 TPSA 134.4 | ✓ Ro5 | ✓ Clean |
CCCCCCCC(=O)OC[C@H](CO[P@@](=O)(O)OCCN)OC(=O)CC…
|
| ZINC102190512 | 1.000 | 467.5 Da LogP 4.25 TPSA 134.4 | ✓ Ro5 | ✓ Clean |
CCCCCCCC(=O)OC[C@@H](CO[P@@](=O)(O)OCCN)OC(=O)C…
|
| ZINC27416437 | 0.976 | 411.4 Da LogP 2.69 TPSA 134.4 | ✓ Ro5 | ✓ Clean |
CCCCCC(=O)OC[C@H](CO[P@](=O)(O)OCCN)OC(=O)CCCCC
|
| ZINC33902364 | 0.976 | 411.4 Da LogP 2.69 TPSA 134.4 | ✓ Ro5 | ✓ Clean |
CCCCCC(=O)OC[C@@H](CO[P@@](=O)(O)OCCN)OC(=O)CCC…
|
| ZINC13544781 | 0.771 | 482.6 Da LogP 4.22 TPSA 108.4 | ✓ Ro5 | ✓ Clean |
CCCCCCC(=O)OC[C@@H](CO[P@](=O)(O)OCC[N+](C)(C)C…
|
| ZINC13544783 | 0.771 | 482.6 Da LogP 4.22 TPSA 108.4 | ✓ Ro5 | ✓ Clean |
CCCCCCC(=O)OC[C@H](CO[P@](=O)(O)OCC[N+](C)(C)C)…
|
| ZINC13543439 | 0.750 | 454.5 Da LogP 3.44 TPSA 108.4 | ✓ Ro5 | ✓ Clean |
CCCCCC(=O)OC[C@@H](CO[P@](=O)(O)OCC[N+](C)(C)C)…
|
| ZINC13543441 | 0.750 | 454.5 Da LogP 3.44 TPSA 108.4 | ✓ Ro5 | ✓ Clean |
CCCCCC(=O)OC[C@H](CO[P@](=O)(O)OCC[N+](C)(C)C)O…
|
| ZINC102190945 | 0.739 | 411.5 Da LogP 3.29 TPSA 128.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCC(=O)OC[C@@H](O)CO[P@@](=O)(O)OCCN
|
| ZINC32840692 | 0.739 | 425.5 Da LogP 3.68 TPSA 128.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCCC(=O)OC[C@@H](O)CO[P@](=O)(O)OCCN
|
| ZINC32840693 | 0.739 | 425.5 Da LogP 3.68 TPSA 128.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCCC(=O)OC[C@H](O)CO[P@](=O)(O)OCCN
|
| ZINC32840704 | 0.739 | 453.6 Da LogP 4.46 TPSA 128.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCCCCC(=O)OC[C@@H](O)CO[P@](=O)(O)OCCN
|
| ZINC32840705 | 0.739 | 453.6 Da LogP 4.46 TPSA 128.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCCCCC(=O)OC[C@H](O)CO[P@](=O)(O)OCCN
|
| ZINC95635984 | 0.739 | 397.4 Da LogP 2.90 TPSA 128.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCC(=O)OC[C@@H](O)CO[P@@](=O)(O)OCCN
|
| ZINC102191119 | 0.729 | 498.6 Da LogP 3.65 TPSA 148.8 | ✓ Ro5 | ✓ Clean |
CCCCCCCC(=O)OC[C@H](CO[P@@](=O)(O)OC[C@@H](O)CO…
|
| ZINC58649551 | 0.729 | 498.6 Da LogP 3.65 TPSA 148.8 | ✓ Ro5 | ✓ Clean |
CCCCCCCC(=O)OC[C@H](CO[P@@](=O)(O)OC[C@H](O)CO)…
|
| ZINC36178999 | 0.727 | 424.5 Da LogP 4.27 TPSA 119.4 | ✓ Ro5 | ✓ Clean |
CCCCCCCC(=O)OC[C@@H](COP(=O)(O)O)OC(=O)CCCCCCC
|
| ZINC36179002 | 0.727 | 424.5 Da LogP 4.27 TPSA 119.4 | ✓ Ro5 | ✓ Clean |
CCCCCCCC(=O)OC[C@H](COP(=O)(O)O)OC(=O)CCCCCCC
|
| ZINC13543394 | 0.708 | 455.4 Da LogP 2.15 TPSA 171.7 | ✓ Ro5 | ✓ Clean |
CCCCCC(=O)OC[C@H](CO[P@@](=O)(O)OC[C@H](N)C(=O)…
|
| ZINC5820131 | 0.705 | 368.4 Da LogP 2.71 TPSA 119.4 | ✓ Ro5 | ✓ Clean |
CCCCCC(=O)OC[C@@H](COP(=O)(O)O)OC(=O)CCCCC
|
| ZINC5820134 | 0.705 | 368.4 Da LogP 2.71 TPSA 119.4 | ✓ Ro5 | ✓ Clean |
CCCCCC(=O)OC[C@H](COP(=O)(O)O)OC(=O)CCCCC
|
| ZINC33822387 | 0.694 | 426.5 Da LogP 2.66 TPSA 108.4 | ✓ Ro5 | ✓ Clean |
CCCCC(=O)OC[C@H](CO[P@@](=O)(O)OCC[N+](C)(C)C)O…
|
| ZINC33822389 | 0.694 | 426.5 Da LogP 2.66 TPSA 108.4 | ✓ Ro5 | ✓ Clean |
CCCCC(=O)OC[C@@H](CO[P@@](=O)(O)OCC[N+](C)(C)C)…
|
| ZINC1501016364 | 0.654 | 465.6 Da LogP 4.63 TPSA 128.3 | ✓ Ro5 | ✓ Clean |
CCCCCC/C=C\CCCCCCCCC(=O)OC[C@@H](O)CO[P@](=O)(O…
|
| ZINC4521879 | 0.634 | 386.5 Da LogP 4.73 TPSA 78.9 | ✓ Ro5 | ✓ Clean |
CCCCCC(=O)OCC(COC(=O)CCCCC)OC(=O)CCCCC
|
| ZINC12834352 | 0.620 | 398.4 Da LogP 1.88 TPSA 108.4 | ✓ Ro5 | ✓ Clean |
CCCC(=O)OC[C@@H](CO[P@](=O)(O)OCC[N+](C)(C)C)OC…
|
| ZINC12834353 | 0.620 | 398.4 Da LogP 1.88 TPSA 108.4 | ✓ Ro5 | ✓ Clean |
CCCC(=O)OC[C@H](CO[P@](=O)(O)OCC[N+](C)(C)C)OC(…
|
| ZINC36079847 | 0.578 | 344.5 Da LogP 4.15 TPSA 72.8 | ✓ Ro5 | ✓ Clean |
CCCCCCCC(=O)OC[C@@H](CO)OC(=O)CCCCCCC
|
| ZINC8214428 | 0.578 | 344.5 Da LogP 4.15 TPSA 72.8 | ✓ Ro5 | ✓ Clean |
CCCCCCCC(=O)OC[C@H](CO)OC(=O)CCCCCCC
|
| ZINC13521162 | 0.574 | 299.2 Da LogP -0.43 TPSA 134.4 | ✓ Ro5 | ✓ Clean |
CC(=O)OC[C@@H](CO[P@](=O)(O)OCCN)OC(C)=O
|
| ZINC3798545 | 0.574 | 299.2 Da LogP -0.43 TPSA 134.4 | ✓ Ro5 | ✓ Clean |
CC(=O)OC[C@H](CO[P@@](=O)(O)OCCN)OC(C)=O
|
| ZINC4521911 | 0.571 | 344.4 Da LogP 3.56 TPSA 78.9 | ✓ Ro5 | ✓ Clean |
CCCCC(=O)OCC(COC(=O)CCCC)OC(=O)CCCC
|
| ZINC102189757 | 0.566 | 454.6 Da LogP 4.04 TPSA 102.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCC(=O)OC[C@H](O)CO[P@@](=O)(O)OCC[N+…
|
| ZINC13544128 | 0.566 | 370.4 Da LogP 1.70 TPSA 102.3 | ✓ Ro5 | ✓ Clean |
CCCCCCC(=O)OC[C@@H](O)CO[P@](=O)(O)OCC[N+](C)(C…
|
| ZINC14880038 | 0.566 | 440.5 Da LogP 3.65 TPSA 102.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCC(=O)OC[C@@H](O)CO[P@](=O)(O)OCC[N+]…
|
| ZINC14880039 | 0.566 | 440.5 Da LogP 3.65 TPSA 102.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCC(=O)OC[C@H](O)CO[P@@](=O)(O)OCC[N+]…
|
| ZINC15297567 | 0.566 | 468.6 Da LogP 4.43 TPSA 102.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCCC(=O)OC[C@@H](O)CO[P@@](=O)(O)OCC[…
|
| ZINC32789157 | 0.566 | 412.5 Da LogP 2.87 TPSA 102.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCC(=O)OC[C@@H](O)CO[P@](=O)(O)OCC[N+](C…
|
| ZINC32789161 | 0.566 | 412.5 Da LogP 2.87 TPSA 102.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCC(=O)OC[C@H](O)CO[P@](=O)(O)OCC[N+](C)…
|
| ZINC32822149 | 0.566 | 468.6 Da LogP 4.43 TPSA 102.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCCC(=O)OC[C@H](O)CO[P@](=O)(O)OCC[N+…
|
| ZINC32822162 | 0.566 | 482.6 Da LogP 4.82 TPSA 102.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCCCC(=O)OC[C@@H](O)CO[P@@](=O)(O)OCC…
|
| ZINC32822163 | 0.566 | 482.6 Da LogP 4.82 TPSA 102.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCCCC(=O)OC[C@H](O)CO[P@](=O)(O)OCC[N…
|
| ZINC44305349 | 0.566 | 454.6 Da LogP 4.04 TPSA 102.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCC(=O)OC[C@@H](O)CO[P@@](=O)(O)OCC[N…
|
| ZINC44405718 | 0.566 | 398.5 Da LogP 2.48 TPSA 102.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCC(=O)OC[C@@H](O)CO[P@@](=O)(O)OCC[N+](C…
|
| ZINC44405722 | 0.566 | 426.5 Da LogP 3.26 TPSA 102.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCC(=O)OC[C@@H](O)CO[P@@](=O)(O)OCC[N+]…
|
| ZINC85576534 | 0.566 | 384.4 Da LogP 2.09 TPSA 102.3 | ✓ Ro5 | ✓ Clean |
CCCCCCCC(=O)OC[C@@H](O)CO[P@@](=O)(O)OCC[N+](C)…
|
| ZINC62592202 | 0.560 | 456.5 Da LogP 3.08 TPSA 142.8 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCCC(=O)OC[C@H](O)CO[P@@](=O)(O)OC[C@…
|
| ZINC62592203 | 0.560 | 456.5 Da LogP 3.08 TPSA 142.8 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCCC(=O)OC[C@@H](O)CO[P@@](=O)(O)OC[C…
|
| ZINC62592204 | 0.560 | 484.6 Da LogP 3.86 TPSA 142.8 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCCCCC(=O)OC[C@@H](O)CO[P@@](=O)(O)OC…
|
| ZINC96094841 | 0.560 | 456.5 Da LogP 3.08 TPSA 142.8 | ✓ Ro5 | ✓ Clean |
CCCCCCCCCCCCCC(=O)OC[C@@H](O)CO[P@@](=O)(O)OC[C…
|
PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.