Protein profile

PA1177

nitrate reductase protein NapE

Genome: NC_002516.2

Gene: PA1177 napE Structure source: AlphaFold UniProt Q9I4G0
Amino acids 55
Annotations 0
Features 8
PDB binders 0
Druggability 0.93

Overview

Basic information about this protein and its source genome.

Accession
PA1177
Gene
PA1177 napE
Status
annotated
Amino acids
55
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
Y
Localization
CytoplasmicMembrane

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.93
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

8 records
Show feature table
Start End DB Term Name
11 52 NCBIfam TIGR02973 periplasmic nitrate reductase, NapE protein
11 52 InterPro IPR004448 Nitrate reductas, NapE, periplasmic
45 55 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
17 39 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
17 44 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
1 16 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
2 53 Pfam PF06796 Periplasmic nitrate reductase protein NapE
2 53 InterPro IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA1177
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
2 0.93
1 0.529