Protein profile

PA1356

hypothetical protein

Genome: NC_002516.2

Gene: PA1356 Structure source: AlphaFold UniProt Q9I3Y8
Amino acids 368
Annotations 2
Features 5
PDB binders 0
Druggability 0.596

Overview

Basic information about this protein and its source genome.

Accession
PA1356
Gene
PA1356
Status
annotated
Amino acids
368
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Unknown

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.596
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

MSERLYVGTRKGLFELRRNAAGQWLPMASHFLGEPLSMLLADPRDGALYAALNLGHFGVKLWRRDAGATDWMECAVPVYPPQPPAAEPLEGQAAEPPWSLQQLWILEPGGADRPGTLWAGTIPGGLFRSDDRGASWRLNRELWERPERAQWFGGGYDHPGIHSICVDPRDSRHLTVAVSCGGVWQSHDDGRSWTCTTKGMRADYMPPEQSEEAAIQDPHRLVQCQARPEFLWVQHHNGIFRSRDGGLHWQGVVAEPSSFGFAVAVHPRQPDTAWFVPATKDECRIPRDARFVVTRTRDGGRSFETLERGLPDGPAYDLVYRHGLDIDPSGERLAMGSTTGGLWLSENGGEDWQQLSANLPPIYCVRFA

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

2 GO

Gene Ontology (GO)

2
  • GO:0010411 The chemical reactions and pathways involving xyloglucan, the cross-linking glycan composed of (1->4)-beta-D-glucan backbone substituted at regular intervals with beta-D-xylosyl-(1->6) residues, which is present in the primary cell wall of most higher plants.
  • GO:0005515 Binding to a protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

5 records
Show feature table
Start End DB Term Name
126 316 CDD cd15482 Sialidase_non-viral
1 368 Gene3D G3DSA:2.130.10.10 -
1 368 InterPro IPR015943 WD40/YVTN repeat-like-containing domain superfamily
2 353 SUPERFAMILY SSF110296 Oligoxyloglucan reducing end-specific cellobiohydrolase
1 292 PANTHER PTHR43739 XYLOGLUCANASE (EUROFUNG)

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

Legend High Medium Low

Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA1356
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
4 0.596
2 0.532
1 0.526