Protein profile

PA1429

cation-transporting P-type ATPase

Genome: NC_002516.2

Gene: PA1429 Structure source: AlphaFold UniProt Q9I3R5
Amino acids 902
Annotations 7
Features 81
PDB binders 5
Druggability 0.898

Overview

Basic information about this protein and its source genome.

Accession
PA1429
Gene
PA1429
Status
annotated
Amino acids
902
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
53.488
Human E-value
1.2500000000000001e-22
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
CytoplasmicMembrane

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.898
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

7 GO

Gene Ontology (GO)

7
  • GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
  • GO:0005524 Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
  • GO:0016887 Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.
  • GO:0005388 Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(in) = ADP + phosphate + Ca2+(out).
  • GO:0000166 Binding to a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
  • GO:0016020 A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
  • GO:0005215 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, accross or in between cells.

Sequence Features

Domain/signature hits from InterPro and related databases.

81 records
Show feature table
Start End DB Term Name
329 650 Pfam PF00702 haloacid dehalogenase-like hydrolase
11 84 SMART SM00831 Cation_ATPase_N_a_2
11 84 InterPro IPR004014 Cation-transporting P-type ATPase, N-terminal
13 78 Pfam PF00690 Cation transporter/ATPase, N-terminus
13 78 InterPro IPR004014 Cation-transporting P-type ATPase, N-terminal
790 800 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
19 879 PANTHER PTHR42861 CALCIUM-TRANSPORTING ATPASE
251 272 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
329 681 Gene3D G3DSA:3.40.50.1000 -
329 681 InterPro IPR023214 HAD superfamily
839 856 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
305 695 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
342 542 Gene3D G3DSA:3.40.1110.10 -
342 542 InterPro IPR023299 P-type ATPase, cytoplasmic domain N
857 875 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
314 688 SFLD SFLDF00027 p-type atpase
314 688 InterPro IPR044492 P-type ATPase, haloacid dehalogenase domain
90 107 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
668 693 PRINTS PR00120 H+-transporting ATPase (proton pump) signature
668 693 InterPro IPR001757 P-type ATPase
636 652 PRINTS PR00120 H+-transporting ATPase (proton pump) signature
636 652 InterPro IPR001757 P-type ATPase
608 624 PRINTS PR00120 H+-transporting ATPase (proton pump) signature
608 624 InterPro IPR001757 P-type ATPase
493 511 PRINTS PR00120 H+-transporting ATPase (proton pump) signature
493 511 InterPro IPR001757 P-type ATPase
30 891 CDD cd02080 P-type_ATPase_cation
801 818 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
696 718 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
728 745 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
121 312 Pfam PF00122 E1-E2 ATPase
273 277 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
91 110 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
11 898 SUPERFAMILY SSF81665 Calcium ATPase, transmembrane domain M
11 898 InterPro IPR023298 P-type ATPase, transmembrane domain superfamily
876 894 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
819 838 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
334 340 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site.
334 340 InterPro IPR018303 P-type ATPase, phosphorylation site
895 902 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
283 305 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
607 728 NCBIfam TIGR01494 HAD-IC family P-type ATPase
607 728 InterPro IPR001757 P-type ATPase
90 353 NCBIfam TIGR01494 HAD-IC family P-type ATPase
90 353 InterPro IPR001757 P-type ATPase
67 85 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
871 893 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
839 856 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
332 346 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature
169 183 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature
535 546 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature
660 672 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature
636 655 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature
557 567 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature
251 273 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
111 250 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
746 764 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
342 542 FunFam G3DSA:3.40.1110.10:FF:000094 Cation-transporting P-type ATPase
122 229 SUPERFAMILY SSF81653 Calcium ATPase, transduction domain A
122 229 InterPro IPR008250 P-type ATPase, A domain superfamily
330 740 SUPERFAMILY SSF56784 HAD-like
330 740 InterPro IPR036412 HAD-like superfamily
696 721 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
314 688 SFLD SFLDG00002 C1.7: P-type atpase like
721 893 Pfam PF00689 Cation transporting ATPase, C-terminus
721 893 InterPro IPR006068 Cation-transporting P-type ATPase, C-terminal
278 304 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
765 789 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
1 66 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
339 539 SUPERFAMILY SSF81660 Metal cation-transporting ATPase, ATP-binding domain N
339 539 InterPro IPR023299 P-type ATPase, cytoplasmic domain N
329 341 FunFam G3DSA:3.40.50.1000:FF:000001 Phospholipid-transporting ATPase IC
768 790 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
30 232 Gene3D G3DSA:2.70.150.10 -
86 90 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
62 895 Gene3D G3DSA:1.20.1110.10 -
722 726 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
800 819 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
727 745 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
64 86 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
899 902 Coils Coil Coil

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

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Structural evidence

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Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA1429
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
14 0.747
17 0.689
21 0.452
22 0.304

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

63 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
ACP P11607-2 505.2 Da LogP -1.52 TPSA 269.9 3 viol. ✓ Clean c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)…
ALF Q8Y8Q5 103.0 Da LogP 1.30 TPSA 0.0 ✓ Ro5 ✓ Clean F[Al-](F)(F)F
CZA P11607-2 336.4 Da LogP 2.83 TPSA 73.4 ✓ Ro5 ✓ Clean CC(=O)C1=C(N2[C@H](C1=O)[C@H]3c4c[nH]c5c4c(ccc5…
MGF P11607-2 81.3 Da LogP 0.88 TPSA 0.0 ✓ Ro5 ✓ Clean F[Mg-](F)F
PCW P16615-2 787.1 Da LogP 12.36 TPSA 108.4 2 viol. ✓ Clean CCCCCCCC\C=C/CCCCCCCC(=O)OC[C@H](CO[P@@](=O)(O)…

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.