Protein profile

PA1539

hypothetical protein

Genome: NC_002516.2

Gene: PA1539 Structure source: AlphaFold UniProt Q9I3H4
Amino acids 282
Annotations 1
Features 12
PDB binders 0
Druggability 0.845

Overview

Basic information about this protein and its source genome.

Accession
PA1539
Gene
PA1539
Status
annotated
Amino acids
282
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.845
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 GO

Gene Ontology (GO)

1
  • GO:0003677 Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

Sequence Features

Domain/signature hits from InterPro and related databases.

12 records
Show feature table
Start End DB Term Name
239 253 MobiDBLite mobidb-lite consensus disorder prediction
58 236 Gene3D G3DSA:1.10.357.10 Tetracycline Repressor, domain 2
4 229 PANTHER PTHR47752 HTH-TYPE TRANSCRIPTIONAL REPRESSOR FABR
14 75 ProSiteProfiles PS50977 TetR-type HTH domain profile.
14 75 InterPro IPR001647 DNA-binding HTH domain, TetR-type
237 282 MobiDBLite mobidb-lite consensus disorder prediction
20 63 Pfam PF00440 Bacterial regulatory proteins, tetR family
20 63 InterPro IPR001647 DNA-binding HTH domain, TetR-type
12 57 Gene3D G3DSA:1.10.10.60 -
265 282 MobiDBLite mobidb-lite consensus disorder prediction
17 79 SUPERFAMILY SSF46689 Homeodomain-like
17 79 InterPro IPR009057 Homeobox-like domain superfamily

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA1539
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.845