Protein profile

PA1549

cation-transporting P-type ATPase

Genome: NC_002516.2

Gene: PA1549 Structure source: AlphaFold UniProt Q9I3G8
Amino acids 811
Annotations 12
Features 71
PDB binders 6
Druggability 0.617

Overview

Basic information about this protein and its source genome.

Accession
PA1549
Gene
PA1549
Status
annotated
Amino acids
811
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
39.394
Human E-value
9.22e-07
Gut microbiome off-target
hit
Essential (DEG)
Y
Localization
CytoplasmicMembrane

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.617
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

12 GO

Gene Ontology (GO)

12
  • GO:0016020 A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
  • GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
  • GO:0005524 Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
  • GO:0016887 Catalysis of the reaction: ATP + H2O = ADP + H+ phosphate. ATP hydrolysis is used in some reactions as an energy source, for example to catalyze a reaction or drive transport against a concentration gradient.
  • GO:0005507 Binding to a copper (Cu) ion.
  • GO:0043682 Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out).
  • GO:0055070 Any process involved in the maintenance of an internal steady state of copper ions within an organism or cell.
  • GO:0000166 Binding to a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
  • GO:0019829 Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in).
  • GO:0046872 Binding to a metal ion.
  • GO:0006812 The directed movement of a monoatomic cation, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Monatomic cations (also called simple cations) are positively charged ions consisting of exactly one atom.
  • GO:0005215 Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, accross or in between cells.

Sequence Features

Domain/signature hits from InterPro and related databases.

71 records
Show feature table
Start End DB Term Name
269 273 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
754 773 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
795 811 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
504 708 Pfam PF00702 haloacid dehalogenase-like hydrolase
274 292 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
694 716 ProSitePatterns PS01229 Hypothetical cof family signature 2.
519 627 Gene3D G3DSA:3.40.1110.10 -
519 627 InterPro IPR023299 P-type ATPase, cytoplasmic domain N
1 180 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
262 501 SUPERFAMILY SSF81665 Calcium ATPase, transmembrane domain M
262 501 InterPro IPR023298 P-type ATPase, transmembrane domain superfamily
293 426 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
215 237 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
248 796 NCBIfam TIGR01525 heavy metal translocating P-type ATPase
248 796 InterPro IPR027256 P-type ATPase, subfamily IB
7 89 Pfam PF12156 Putative metal-binding domain of cation transport ATPase
7 89 InterPro IPR021993 Putative metal-binding domain of cation transport ATPase
276 797 NCBIfam TIGR01512 cadmium family heavy metal-translocating P-type ATPase
231 796 NCBIfam TIGR01511 copper-translocating P-type ATPase
506 794 SUPERFAMILY SSF56784 HAD-like
506 794 InterPro IPR036412 HAD-like superfamily
479 748 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
284 772 NCBIfam TIGR01494 HAD-IC family P-type ATPase
284 772 InterPro IPR001757 P-type ATPase
213 234 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
181 200 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
427 449 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
310 487 Pfam PF00122 E1-E2 ATPase
510 516 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site.
510 516 InterPro IPR018303 P-type ATPase, phosphorylation site
641 651 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature
717 729 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature
694 713 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature
508 522 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature
360 374 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature
97 156 Pfam PF00403 Heavy-metal-associated domain
97 156 InterPro IPR006121 Heavy metal-associated domain, HMA
450 454 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
93 159 ProSiteProfiles PS50846 Heavy-metal-associated domain profile.
93 159 InterPro IPR006121 Heavy metal-associated domain, HMA
455 478 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
202 212 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
749 770 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
501 744 Gene3D G3DSA:3.40.50.1000 -
501 744 InterPro IPR023214 HAD superfamily
776 794 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
323 409 SUPERFAMILY SSF81653 Calcium ATPase, transduction domain A
323 409 InterPro IPR008250 P-type ATPase, A domain superfamily
427 449 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
771 775 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
97 156 CDD cd00371 HMA
297 414 Gene3D G3DSA:2.70.150.10 -
91 798 PANTHER PTHR43520 ATP7, ISOFORM B
90 159 Gene3D G3DSA:3.30.70.100 -
184 795 CDD cd02079 P-type_ATPase_HM
235 245 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
454 473 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
87 164 SUPERFAMILY SSF55008 HMA, heavy metal-associated domain
87 164 InterPro IPR036163 Heavy metal-associated domain superfamily
246 268 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
274 292 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
777 794 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
97 106 PRINTS PR00941 Cadmium-transporting ATPase signature
97 106 InterPro IPR027256 P-type ATPase, subfamily IB
376 392 PRINTS PR00941 Cadmium-transporting ATPase signature
376 392 InterPro IPR027256 P-type ATPase, subfamily IB
108 129 PRINTS PR00941 Cadmium-transporting ATPase signature
108 129 InterPro IPR027256 P-type ATPase, subfamily IB
297 414 FunFam G3DSA:2.70.150.10:FF:000002 Copper-transporting ATPase 1, putative
181 201 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
250 269 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA1549
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
3 0.617
2 0.337

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

56 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
A99 Q97UU7 656.3 Da LogP 1.06 TPSA 311.3 3 viol. ✓ Clean C[C@@H](c1ccccc1[N+](=O)[O-])OP(=O)(O)OP(=O)(O)…
ACP O29777 505.2 Da LogP -1.52 TPSA 269.9 3 viol. ✓ Clean c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)…
ALF Q3YW59 103.0 Da LogP 1.30 TPSA 0.0 ✓ Ro5 ✓ Clean F[Al-](F)(F)F
BEF Q3YW59 66.0 Da LogP 0.88 TPSA 0.0 ✓ Ro5 ✓ Clean [Be-](F)(F)F
MGF Q5ZWR1 81.3 Da LogP 0.88 TPSA 0.0 ✓ Ro5 ✓ Clean F[Mg-](F)F
NH4 Q9SZC9 18.0 Da LogP 0.38 TPSA 36.5 ✓ Ro5 ✓ Clean [NH4+]

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.