Overview
Basic information about this protein and its source genome.
- Accession
- PA1702
- Gene
- PA1702
- Status
- annotated
- Amino acids
- 109
- Structure source
- AlphaFold
Target profile
Computed evidence for target prioritization.
- Human off-target
- No hit
- Gut microbiome off-target
- hit
- Essential (DEG)
- N
- Localization
- Cytoplasmic
Selected Druggability evidence
Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.
Sequence
Primary amino-acid sequence viewer.
MTLKPTQQRLLLMLGWLHLQCGQPRRAQVLLEALLSVAPERRDGRRALLLALLQQGLGEPAVRLCRQLQEDGEEEPGLWRCLSRAEQLAGRLDAARAAHARALELEARE
Functional Annotations
Enzyme classification and Gene Ontology terms linked to this protein.
Gene Ontology (GO)
3- GO:0005737 The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
- GO:0030254 The process in which proteins are transferred into the extracellular milieu or directly into host cells by the bacterial type III secretion system; secretion occurs in a continuous process without the distinct presence of periplasmic intermediates and does not involve proteolytic processing of secreted proteins.
- GO:0005515 Binding to a protein.
Sequence Features
Domain/signature hits from InterPro and related databases.
Show feature table
| Start | End | DB | Term | Name |
|---|---|---|---|---|
| 1 | 109 | PIRSF | PIRSF017117 | YscY |
| 1 | 109 | InterPro | IPR016684 | Type III secretion system chaperone, YscY |
| 22 | 27 | Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. |
| 1 | 27 | Phobius | SIGNAL_PEPTIDE | Signal peptide region |
| 2 | 109 | SUPERFAMILY | SSF48452 | TPR-like |
| 2 | 109 | InterPro | IPR011990 | Tetratricopeptide-like helical domain superfamily |
| 1 | 22 | SignalP_EUK | SignalP-noTM | SignalP-noTM |
| 1 | 109 | Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain |
| 1 | 109 | InterPro | IPR011990 | Tetratricopeptide-like helical domain superfamily |
| 1 | 9 | Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. |
| 10 | 21 | Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. |
| 28 | 109 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. |
3D Structure
Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.
Loading 3D structure...
Structural evidence
0 + 1Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.
| Entry | Method | Resolution | Chain | Coverage | Links | Status |
|---|---|---|---|---|---|---|
|
AlphaFold
PA1702
|
AlphaFold | — | — | full sequence | — | Viewing |
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer
Pockets (FPOCKET)
Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).
| FPOCKET | Sticks | Spheres | Surfaces | Druggability | Labels | Zoom | Positions |
|---|---|---|---|---|---|---|---|
| 1 | 0.697 |