Protein profile

PA1862

molybdenum ABC transporter permease ModB

Genome: NC_002516.2

Gene: PA1862 modB Structure source: AlphaFold UniProt Q9I2N3
Amino acids 228
Annotations 5
Features 30
PDB binders 0
Druggability 0.918

Overview

Basic information about this protein and its source genome.

Accession
PA1862
Gene
PA1862 modB
Status
annotated
Amino acids
228
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
Y
Localization
CytoplasmicMembrane

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.918
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

5 GO

Gene Ontology (GO)

5
  • GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
  • GO:0015098 Enables the transfer of molybdate (MoO4 2-) ions from one side of a membrane to the other. Molybdate is the bivalent anion derived from molybdic acid.
  • GO:0016020 A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
  • GO:0015689 The directed movement of molybdate (MoO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Molybdate is the bivalent anion derived from molybdic acid.
  • GO:0055085 The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.

Sequence Features

Domain/signature hits from InterPro and related databases.

30 records
Show feature table
Start End DB Term Name
6 218 SUPERFAMILY SSF161098 MetI-like
6 218 InterPro IPR035906 MetI-like superfamily
12 39 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
71 89 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
15 37 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
51 70 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
13 219 ProSiteProfiles PS50928 ABC transporter integral membrane type-1 domain profile.
13 219 InterPro IPR000515 ABC transporter type 1, transmembrane domain MetI-like
31 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component
31 217 InterPro IPR000515 ABC transporter type 1, transmembrane domain MetI-like
1 224 PANTHER PTHR30183 MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEIN MODB
40 50 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
197 219 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
111 150 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
151 176 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
14 219 NCBIfam TIGR02141 molybdate ABC transporter permease subunit
14 219 InterPro IPR011867 Molybdenum transport system permease protein ModB
13 211 CDD cd06261 TM_PBP2
13 211 InterPro IPR000515 ABC transporter type 1, transmembrane domain MetI-like
3 221 Gene3D G3DSA:1.10.3720.10 -
3 221 InterPro IPR035906 MetI-like superfamily
86 108 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
219 228 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
49 71 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
196 218 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
90 110 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
139 161 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
1 11 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
177 195 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
8 221 FunFam G3DSA:1.10.3720.10:FF:000054 Molybdenum transport system permease

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA1862
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.918
3 0.824