Target Pathogen

Overview

Basic information about this protein and its source genome.

Accession: PA2483
Assembly: Pseudomonas aeruginosa PAO1, complete genome
Gene: PA2483
Status: annotated
Amino acids: 333
Structure source: AlphaFold

GO

GO:0005829 The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes. GO:0016705 Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.

Target profile

Computed evidence for target prioritization.

Human off-target: No hit
Gut microbiome off-target: hit
Essential (DEG): N
Localization: Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.757

Structure –

Pocket –

Sequence

Primary amino-acid sequence viewer.

MTTLADIPLSMLDLVPVRTGGSVAEALHNSLDLARHVERLGFNRFWLAEHHNMDGIASSATALLIGHIAGGTSRIRVGSGGVMLPNHAPLVVAENFGTLETLYPGRIDLGLGRAPGADQATMRALRRDRLGNGDDFPEQVAELEMLLGPRRSQQSLLAVPGEGTQVPIWLLGSSLFSAHLAAQKGLPYAFASHFAPRYLHEALRIYRSNFQPSAVLDKPYAMIGVPLIAAPTDEEAEFLATTAFQRVLALIRGESLKQKPPVESMAPLWLPHEQDAVGSFFGLAVIGGPEKVRARLEILLEQTGADELIFTSDFYEHAHRLRSCEIVAELKGA

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

2 GO

Gene Ontology (GO)

2

GO:0005829 The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
GO:0016705 Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.

Sequence Features

Domain/signature hits from InterPro and related databases.

11 records

Show feature table

Start	End	DB	Term	Name
4	331	Gene3D	G3DSA:3.20.20.30	-
4	331	InterPro	IPR036661	Luciferase-like domain superfamily
22	306	Pfam	PF00296	Luciferase-like monooxygenase
22	306	InterPro	IPR011251	Luciferase-like domain
166	213	CDD	cd00347	Flavin_utilizing_monoxygenases
9	329	NCBIfam	TIGR03558	MsnO8 family LLM class oxidoreductase
9	329	InterPro	IPR019949	N-acetyl-S-alkylcysteine monooxygenase-like
5	332	FunFam	G3DSA:3.20.20.30:FF:000002	LLM class flavin-dependent oxidoreductase
1	329	PANTHER	PTHR30137	LUCIFERASE-LIKE MONOOXYGENASE
7	329	SUPERFAMILY	SSF51679	Bacterial luciferase-like
7	329	InterPro	IPR036661	Luciferase-like domain superfamily

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

Loading 3D structure...

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry	Method	Resolution	Chain	Coverage	Links	Status
AlphaFold PA2483	AlphaFold	—	—	full sequence	—	Viewing

Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET	Sticks	Spheres	Surfaces	Druggability	Labels	Zoom	Positions
1				0.757
3				0.466

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

19 records

Highest-confidence structural evidence: ligands co-crystallized with this exact protein. If the source PDB is loaded in TPW, use Open crystal to inspect it in the structure viewer.

No PDB structure with a co-crystallized ligand found for this exact protein.

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Ligand	Source crystal	UniProt (homolog)	MW · LogP · TPSA	Lipinski	PAINS	SMILES
P4G	4US5	W8QCH3	162.2 Da LogP 1.08 TPSA 27.7	✓ Ro5	✓ Clean	`CCOCCOCCOCC`

Experimental bioactivity from ChEMBL measured directly on this protein. Score = pchembl (−log Ki/IC₅₀; higher = more potent).

No ChEMBL bioactivity data found for this exact protein.

Bioactivity inferred from similar proteins in ChEMBL. Score = pchembl (−log Ki/IC₅₀; higher = more potent).

No ChEMBL hits found through similar proteins.

Proposed virtual-screening candidates from ZINC. Score = Tanimoto similarity to a known binder (0–1; higher = more similar).

Ligand	Tanimoto	MW · LogP · TPSA	Lipinski	PAINS	SMILES
ZINC5859031	1.000	294.4 Da LogP 1.13 TPSA 55.4	✓ Ro5	✓ Clean	`CCOCCOCCOCCOCCOCCOCC`
ZINC4974293	0.786	280.4 Da LogP 1.08 TPSA 55.4	✓ Ro5	✓ Clean	`CCOCCOCCOCOCCOCCOCC`
ZINC5650743	0.688	222.3 Da LogP 0.07 TPSA 57.2	✓ Ro5	✓ Clean	`CCOCCOCCOCCOCCO`
ZINC6403917	0.688	354.4 Da LogP 0.11 TPSA 84.8	✓ Ro5	✓ Clean	`CCOCCOCCOCCOCCOCCOCCOCCO`
ZINC16688007	0.647	446.8 Da LogP 4.03 TPSA 36.9	✓ Ro5	✓ Clean	`CCOCCOCCSCCSCCSCCSCCOCCOCC`
ZINC2173592	0.600	216.4 Da LogP 3.79 TPSA 18.5	✓ Ro5	✓ Clean	`CCOCCCCCCCCCOCC`
ZINC28278447	0.600	230.4 Da LogP 4.18 TPSA 18.5	✓ Ro5	✓ Clean	`CCOCCCCCCCCCCOCC`
ZINC39185814	0.579	202.2 Da LogP 1.58 TPSA 27.7	✓ Ro5	✓ Clean	`CCOCCOCCOC(F)(F)F`
ZINC4787572	0.579	248.3 Da LogP 1.23 TPSA 46.2	✓ Ro5	✓ Clean	`C=COCCOCCOCCOCCOCC`
ZINC3780929	0.529	382.5 Da LogP 4.10 TPSA 36.9	✓ Ro5	✓ Clean	`CCOCCP(CCOCC)CCP(CCOCC)CCOCC`
ZINC5462640	0.529	358.7 Da LogP 3.99 TPSA 18.5	✓ Ro5	✓ Clean	`CCOCCSCCSCCSCCSCCOCC`
ZINC1866975	0.526	206.2 Da LogP 1.21 TPSA 54.0	✓ Ro5	✓ Clean	`CCOCCOC(=O)OCCOCC`
ZINC116265921	0.524	206.2 Da LogP 1.21 TPSA 54.0	✓ Ro5	✓ Clean	`CCOCCOCCOC(=O)OCC`
ZINC196806630	0.524	203.2 Da LogP 1.37 TPSA 76.5	✓ Ro5	Alert	`CCOCCOCCOCCN=[N+]=[N-]`
ZINC1613645	0.500	254.3 Da LogP 2.52 TPSA 36.9	✓ Ro5	✓ Clean	`CCOCCOc1ccc(OCCOCC)cc1`
ZINC1697133	0.500	214.4 Da LogP 4.94 TPSA 9.2	✓ Ro5	✓ Clean	`CCCCCCCCCCCCOCC`
ZINC2041048	0.500	218.3 Da LogP 2.64 TPSA 27.7	✓ Ro5	✓ Clean	`CCCCOCCOCCOCCCC`
ZINC4995542	0.500	366.4 Da LogP 0.20 TPSA 98.8	✓ Ro5	✓ Clean	`CCOCCOCCOC(=O)COCC(=O)OCCOCCOCC`

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.

PA2483