Protein profile

PA2502

hypothetical protein

Genome: NC_002516.2

Gene: PA2502 Structure source: AlphaFold UniProt Q9I0Y0
Amino acids 499
Annotations 5
Features 31
PDB binders 41
Druggability 0.689

Overview

Basic information about this protein and its source genome.

Accession
PA2502
Gene
PA2502
Status
annotated
Amino acids
499
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
39.552
Human E-value
1.92e-12
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.689
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

MGQQELAFGGGEFHSLWSCRFGAATLARRGCAFRNALAIMRGFPSALAGVRRTMHTLQQLRSGELAGATRLDLSCGLREFPREIFELADSLEVLNLSGNALDSLPDDLGRLHRLKVLFCSANDFDELPAAVGDCPALSMVGFKSNRIERVPAAALPPALRWLILTDNRIATLPEELGRRPLQKLMLAGNRLEALPESMAACEGLELLRIAANRFQRLPAWLATLPRLAWLAYAGNPLCRLPALADSGIAALDWSELSLDGLIGEGASGVIHRAGWHQPDGSTRTVALKLFKGEVTSDGTPASEMAACLAAGRHAQLIEVLGQLAGHPQGRDGLVLELLDDAYRNLAGPPSLESCTRDVYPPGLRFELATALRLAASLAALMAHLHGRGISHGDFYAHNILWREDGACLLGDFGAASFLPDDAVLAGALRRLEVRAFACLLEELLERSEAPPGQASLSAALVELQRRCALPRVSERPDFGEIQAILRDLAARSQAFPQVR

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

5 GO

Gene Ontology (GO)

5
  • GO:0005737 The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
  • GO:0005524 Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
  • GO:0004672 Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
  • GO:0005515 Binding to a protein.
  • GO:0006468 The process of introducing a phosphate group on to a protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

31 records
Show feature table
Start End DB Term Name
258 418 Pfam PF07714 Protein tyrosine and serine/threonine kinase
258 418 InterPro IPR001245 Serine-threonine/tyrosine-protein kinase, catalytic domain
360 496 Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1
90 111 ProSiteProfiles PS51450 Leucine-rich repeat profile.
90 111 InterPro IPR001611 Leucine-rich repeat
252 486 SUPERFAMILY SSF56112 Protein kinase-like (PK-like)
252 486 InterPro IPR011009 Protein kinase-like domain superfamily
63 238 SUPERFAMILY SSF52058 L domain-like
224 243 SMART SM00364 LRR_bac_2
88 107 SMART SM00364 LRR_bac_2
156 175 SMART SM00364 LRR_bac_2
201 220 SMART SM00364 LRR_bac_2
181 197 SMART SM00364 LRR_bac_2
62 257 PANTHER PTHR48051 -
256 499 ProSiteProfiles PS50011 Protein kinase domain profile.
256 499 InterPro IPR000719 Protein kinase domain
90 128 Pfam PF12799 Leucine Rich repeats (2 copies)
90 128 InterPro IPR025875 Leucine rich repeat 4
90 111 SMART SM00369 LRR_typ_2
90 111 InterPro IPR003591 Leucine-rich repeat, typical subtype
181 201 SMART SM00369 LRR_typ_2
181 201 InterPro IPR003591 Leucine-rich repeat, typical subtype
157 179 SMART SM00369 LRR_typ_2
157 179 InterPro IPR003591 Leucine-rich repeat, typical subtype
262 288 ProSitePatterns PS00107 Protein kinases ATP-binding region signature.
262 288 InterPro IPR017441 Protein kinase, ATP binding site
247 330 Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1
56 146 Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
56 146 InterPro IPR032675 Leucine-rich repeat domain superfamily
147 246 Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor
147 246 InterPro IPR032675 Leucine-rich repeat domain superfamily

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA2502
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.689

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

191 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
15P P06239 1529.8 Da LogP 0.17 TPSA 334.1 2 viol. ✓ Clean COCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCO…
1BQ Q05397 466.6 Da LogP 3.12 TPSA 106.6 ✓ Ro5 ✓ Clean CN1c2ccc(cc2-c3c(cn[nH]3)S1(=O)=O)c4ccc(cc4)C(=…
1G0 Q07912 372.4 Da LogP 4.01 TPSA 85.7 ✓ Ro5 ✓ Clean c1ccc(cc1)Oc2ccc(cc2)c3c4c(nccn4c(n3)C5CC(C5)O)N
30G Q05397 203.2 Da LogP 0.33 TPSA 53.9 ✓ Ro5 ✓ Clean c1ccc2c(c1)N3CC(=O)NN=C3CO2
4GU Q05397 229.2 Da LogP 2.24 TPSA 66.5 ✓ Ro5 ✓ Clean c1ccc(c(c1)Nc2c3cn[nH]c3ncn2)F
4KA Q05397 122.1 Da LogP 0.59 TPSA 57.4 ✓ Ro5 ✓ Clean Cc1c2c(c[nH]n2)[nH]n1
5LK P06239 402.5 Da LogP 2.96 TPSA 82.9 ✓ Ro5 ✓ Clean CN1CCN(CC1)c2cccc(c2)c3cnn4c3N=C[C@H](C4N)c5ccc…
5PB P06239 451.9 Da LogP 4.77 TPSA 77.0 ✓ Ro5 ✓ Clean c1ccc(cc1)COc2ccc(cc2)N3C(=O)NN=C3SCC(=O)c4ccc(…
7KW P06239 313.4 Da LogP 4.28 TPSA 66.5 ✓ Ro5 ✓ Clean c1ccc(cc1)c2c(c[nH]n2)c3ccnc(n3)Nc4ccccc4
9NH P06239 623.6 Da LogP 5.61 TPSA 120.5 2 viol. Alert Cc1ccc(cc1NC(=O)c2cnc(nc2OC)Nc3ccc(cc3)N4CCNCC4…
ACP Q07912 505.2 Da LogP -1.52 TPSA 269.9 3 viol. ✓ Clean c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)…
ANP P06239 506.2 Da LogP -2.06 TPSA 281.9 3 viol. ✓ Clean c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)…
CC0 P06239 619.6 Da LogP 1.94 TPSA 214.6 2 viol. ✓ Clean C[C@@H](c1ccc(c(c1)C(=O)N)OCC2CCCCC2)NC(=O)[C@H…
CC1 P06239 665.6 Da LogP 1.98 TPSA 225.6 2 viol. ✓ Clean CC(=O)N[C@@H](Cc1ccc(c(c1)P(=O)(O)O)P(=O)(O)O)C…
CXS P06239 221.3 Da LogP 1.19 TPSA 66.4 ✓ Ro5 ✓ Clean C1CCC(CC1)NCCCS(=O)(=O)O
DBQ Q07912 245.2 Da LogP -0.70 TPSA 112.4 ✓ Ro5 ✓ Clean c1c[nH]c2c1/C(=C\3/C(=O)NC(=N3)N)/CCNC2=O
GNP Q07912 522.2 Da LogP -2.76 TPSA 301.9 3 viol. ✓ Clean c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O…
H82 Q05397 556.6 Da LogP 3.58 TPSA 106.9 1 viol. ✓ Clean C[NH+]1CCC(CC1)NC(=O)c2ccc(c(c2)OC)Nc3ncc(c(n3)…
K8A Q05397 226.0 Da LogP 1.02 TPSA 67.3 ✓ Ro5 ✓ Clean c1c(cncc1Br)c2n[nH]nn2
KBM P06239 286.7 Da LogP 4.33 TPSA 39.4 ✓ Ro5 ✓ Clean COc1ccc2c(c1)cc(o2)C(=O)c3ccc(cc3)Cl
KSC P06239 366.4 Da LogP 2.71 TPSA 106.6 ✓ Ro5 ✓ Clean Cc1cc(n2c(n1)c(c(n2)Nc3ccc(cc3)OC)C(=O)N)NCC4CC4
KSE P06239 413.5 Da LogP 2.05 TPSA 141.8 ✓ Ro5 ✓ Clean Cc1cc(n2c(n1)c(c(n2)Nc3cc(cc(c3)OC)OC)C(=O)N)NC…
KSH P06239 440.5 Da LogP 2.11 TPSA 127.2 ✓ Ro5 ✓ Clean CCc1cc(n2c(n1)c(c(n2)Nc3cc(cc(c3)OC)OC)C(=O)N)N…
KSK P06239 439.5 Da LogP 2.62 TPSA 141.8 ✓ Ro5 ✓ Clean CC(C)(CNc1cc(nc2n1nc(c2C(=O)N)Nc3cc(cc(c3)OC)OC…
KSM P06239 406.9 Da LogP 4.39 TPSA 57.5 ✓ Ro5 ✓ Clean Cc1cccc(c1Nc2c3cncn3c4cc(ccc4n2)N5CCN[C@H](C5)C…
KSR P06239 278.3 Da LogP 3.13 TPSA 55.7 ✓ Ro5 ✓ Clean Cn1cc(c2c1ccc(c2)OC)c3cc4c([nH]3)nccn4
KSS P06239 315.4 Da LogP 3.53 TPSA 48.7 ✓ Ro5 ✓ Clean CCSc1nc(cc2n1ccn2)c3ccc(c(c3)OC)OC
KZI P06239 386.5 Da LogP 2.02 TPSA 137.4 ✓ Ro5 ✓ Clean COc1cc(cc(c1)OC)Nc2c(ncc(n2)N[C@@H]3CCCC[C@@H]3…
KZL P06239 400.4 Da LogP 1.13 TPSA 154.7 ✓ Ro5 ✓ Clean CC(C)(CN)Nc1nc(c(c2n1cnn2)C(=O)N)Nc3cc(cc(c3)OC…
KZM P06239 518.6 Da LogP 3.04 TPSA 174.9 2 viol. ✓ Clean COc1cc(cc(c1)OC)Nc2c(c3nc(nn3c(n2)N[C@@H]4CCCC[…
MYR P06239 228.4 Da LogP 4.77 TPSA 37.3 ✓ Ro5 ✓ Clean CCCCCCCCCCCCCC(=O)O
ODJ P06239 454.5 Da LogP 4.04 TPSA 102.6 ✓ Ro5 ✓ Clean Cc1cc(ccc1NC(=O)c2cnn3c2ccc(c3)OC)NC(=O)c4c5ccc…
P1E Q05397 458.5 Da LogP 3.04 TPSA 99.2 ✓ Ro5 ✓ Clean CNS(=O)(=O)c1ccc(cc1)Nc2ncc(c(n2)N[C@@H]3CCC[C@…
P9K Q05397 504.5 Da LogP 3.88 TPSA 116.7 1 viol. ✓ Clean CN(c1ccccc1/C=N/c2c(cnc(n2)Nc3ccc4c(c3)CC(=O)N4…
PKE Q05397 439.5 Da LogP 2.12 TPSA 129.2 ✓ Ro5 ✓ Clean CN(c1c(cccn1)CNc2ccnc(n2)Nc3ccc4c(c3)CC(=O)N4)S…
PP2 P06239 302.8 Da LogP 2.90 TPSA 70.9 ✓ Ro5 ✓ Clean CC(C)(C)n1c2c(c([nH+]1)c3ccc(cc3)Cl)c(ncn2)N
PVT Q05397 400.4 Da LogP 3.74 TPSA 91.8 ✓ Ro5 ✓ Clean c1cc(cnc1)CNc2c(cnc(n2)Nc3ccc4c(c3)CC(=O)N4)C(F…
PXK Q05397 218.3 Da LogP 3.22 TPSA 28.7 ✓ Ro5 ✓ Clean CC(C)(C)C#CCc1c[nH]c2c1scn2
Q2H Q05397 450.4 Da LogP 3.78 TPSA 100.4 ✓ Ro5 ✓ Clean CN(c1c(cccn1)/C=N/c2c(cnc(n2)Nc3ccccc3)C(F)(F)F…
STI P06239 493.6 Da LogP 4.59 TPSA 86.3 ✓ Ro5 ✓ Clean Cc1ccc(cc1Nc2nccc(n2)c3cccnc3)NC(=O)c4ccc(cc4)C…
T95 Q07912 582.7 Da LogP 5.39 TPSA 112.1 2 viol. Alert CCOc1ccccc1Oc2c(cnc(n2)Nc3ccc(cc3)N4CCN(CC4)CCO…

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.