Protein profile

PA2627

high frequency lysogenization protein HflD

Genome: NC_002516.2

Gene: PA2627 hflD Structure source: AlphaFold UniProt Q9I0L1
Amino acids 206
Annotations 2
Features 11
PDB binders 0
Druggability 0.438

Overview

Basic information about this protein and its source genome.

Accession
PA2627
Gene
PA2627 hflD
Status
annotated
Amino acids
206
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
Y
Localization
Unknown

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.438
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

2 GO

Gene Ontology (GO)

2
  • GO:0005737 The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
  • GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Sequence Features

Domain/signature hits from InterPro and related databases.

11 records
Show feature table
Start End DB Term Name
3 205 SUPERFAMILY SSF101322 YcfC-like
3 205 InterPro IPR035932 HflD-like superfamily
2 205 PANTHER PTHR38100 HIGH FREQUENCY LYSOGENIZATION PROTEIN HFLD
2 205 InterPro IPR007451 High frequency lysogenization protein HflD
7 197 Pfam PF04356 Protein of unknown function (DUF489)
7 197 InterPro IPR007451 High frequency lysogenization protein HflD
2 205 Gene3D G3DSA:1.10.3890.10 -
2 205 InterPro IPR035932 HflD-like superfamily
1 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD].
1 205 InterPro IPR007451 High frequency lysogenization protein HflD
2 205 FunFam G3DSA:1.10.3890.10:FF:000003 High frequency lysogenization protein HflD homolog

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA2627
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.438
2 0.429
4 0.415