Protein profile

PA2735

restriction-modification system protein

Genome: NC_002516.2

Gene: PA2735 Structure source: AlphaFold UniProt Q9I0A7
Amino acids 792
Annotations 9
Features 18
PDB binders 0
Druggability 0.422

Overview

Basic information about this protein and its source genome.

Accession
PA2735
Gene
PA2735
Status
annotated
Amino acids
792
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.422
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 EC 8 GO

Enzyme Commission (EC)

1

Gene Ontology (GO)

8
  • GO:0003677 Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
  • GO:0008170 Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule.
  • GO:0009007 Catalysis of the reaction: S-adenosyl-L-methionine + DNA adenine = S-adenosyl-L-homocysteine + DNA 6-methylaminopurine.
  • GO:0009307 A defense process found in many bacteria and archaea that protects the organism from invading foreign DNA by cleaving it with a restriction endonuclease. The organism's own DNA is protected by methylation of a specific nucleotide, which occurs immediately following replication, in the same target site as the restriction enzyme.
  • GO:0032259 The process in which a methyl group is covalently attached to a molecule.
  • GO:0003676 Binding to a nucleic acid.
  • GO:0008168 Catalysis of the transfer of a methyl group to an acceptor molecule.
  • GO:0006306 OBSOLETE. The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.

Sequence Features

Domain/signature hits from InterPro and related databases.

18 records
Show feature table
Start End DB Term Name
1 412 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
230 244 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature
311 323 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature
199 215 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature
176 492 Pfam PF02384 N-6 DNA Methylase
176 492 InterPro IPR003356 DNA methylase, adenine-specific
413 438 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
178 507 Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39
178 507 InterPro IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily
439 792 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
16 150 Pfam PF12161 HsdM N-terminal domain
16 150 InterPro IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain
314 320 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature.
314 320 InterPro IPR002052 DNA methylase, N-6 adenine-specific, conserved site
15 569 SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases
15 569 InterPro IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily
9 676 PANTHER PTHR42933 SLR6095 PROTEIN
569 592 MobiDBLite mobidb-lite consensus disorder prediction

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA2735
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.332
4 0.285
3 0.244