Protein profile

PA3271

two-component sensor

Genome: NC_002516.2

Gene: PA3271 Structure source: AlphaFold UniProt Q9HYX0
Amino acids 1159
Annotations 12
Features 90
PDB binders 2
Druggability 0.756

Overview

Basic information about this protein and its source genome.

Accession
PA3271
Gene
PA3271
Status
annotated
Amino acids
1159
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
CytoplasmicMembrane

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.756
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

MSLSIGLIAVVALVYMAILFAIAFYGDRRRTPLSPRLRAWVYSLSLAVYCTSWTFFGAVGQATDQLWSFLPIYLGPVLLMLFAPWVLQKMIMISKQENITSIADFIAARYGKSQALAVVVALICMVGVLPYIALQLKGIVLGVNLLIGSGADSTGTRAQDTALIVSLVLALFTIVFGTRSLDVTEHHRGMVLAIAFESLVKLTAFLAVGIFATFGLYDGFADLFSQARAAPQLADYWEETVHWPAMLLQTGVAMTAIMCLPRQFHVTVVENIEPRDLNLARWVFPIYLVLAALFVVPIALAGQLHLPAGVMPDSFVISLPLAEAHPALALLAFIGGASAATGMVIVASVALSTMVSNDMLLPWLLRRREKDTERPFEAFRHWLLTVRRVSIAVILLLAYVAYRLLGSSASLATIGQIAFAAIAQLGPAMIGALYWKQANRRGVFAGLAAGSLLWAYTLVLPVVAKGLGWPLERIPGLTWLASNPFGLPIEPLTQGVLISLVGNFALFGLVSVLSRTRVSEHWQASRFIGQEISQRQNSRFMLAVQVEDLLMLAARFVGEERARQSFIRFAYRQGKGFTPNQTANNEWIAHTERLLAGVLGASSARAVVKAAIEGREMQVEDVVRIADEASEVLQFNRALLQGAIENITQGISVVDQSLRLVAWNHRYLELFEYPDGLIYVGRPIADIIRYNADRGLCGPGDPDMHVAKRLYWMRQGTPHTSERLFPNGRVIELIGNPMPGGGFVMSFTDITAYREAEQGLKGANESLEQRVQERTQELSQLNQELSEAKSNAEAANQSKTRFLAAVSHDLMQPLNAARLFSAALAHQDALPGEVRDLVQHLDSSLRSAEDLITDLLDISRLESGRVSAERNPFPLNNLYDALGVEFKALAQEQGLHFRLRGSQLRVDSDIKLLRRILQNFLTNAFRYAKGHVLLGVRREDGYLRLEVWDQGPGIPPDKQKVIFEEFKRLDSHQTRAEKGLGLGLAIADRLCKVLGHPLEVRSWPGKGSVFSVRVPLARQAPPALANGHKAEPAQALNGAQVLCVDNEDSILAGMNSLLSRWGCQVWTARSREECATLLDSEMRPQLALIDYHLDDGETGTQLMAWLRTRLGEPVPGVVISADARPELVAEIHAAGLDYLSKPVKPAALRALLSRHLSLR

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 EC 11 GO

Enzyme Commission (EC)

1

Gene Ontology (GO)

11
  • GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
  • GO:0009927 Serves as a phospho-His intermediate enabling the transfer of phospho group between a hybrid kinase and a response regulator.
  • GO:0000155 Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.
  • GO:0022857 Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.
  • GO:0000160 A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.
  • GO:1900376 Any process that modulates the frequency, rate or extent of secondary metabolite biosynthetic process.
  • GO:0055085 The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.
  • GO:0016020 A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
  • GO:0007165 The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
  • GO:0016772 Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
  • GO:0016310 The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.

Sequence Features

Domain/signature hits from InterPro and related databases.

90 records
Show feature table
Start End DB Term Name
873 1022 Gene3D G3DSA:3.30.565.10 -
873 1022 InterPro IPR036890 Histidine kinase/HSP90-like ATPase superfamily
626 758 Gene3D G3DSA:3.30.450.20 PAS domain
442 464 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
644 758 Pfam PF12860 PAS fold
39 61 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
61 65 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
161 178 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
362 381 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
514 1159 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
757 862 FunFam G3DSA:1.10.287.130:FF:000063 Hybrid sensor histidine kinase/response regulator
279 301 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
414 435 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
65 87 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
762 862 Gene3D G3DSA:1.10.287.130 -
241 260 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
626 756 FunFam G3DSA:3.30.450.20:FF:000073 Putative Sensor histidine kinase
492 513 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
309 327 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
465 491 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
199 221 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
4 26 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
1041 1151 Pfam PF00072 Response regulator receiver domain
1041 1151 InterPro IPR001789 Signal transduction response regulator, receiver domain
629 751 SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain)
629 751 InterPro IPR035965 PAS domain superfamily
218 240 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
442 464 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
161 178 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
66 87 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
1040 1156 ProSiteProfiles PS50110 Response regulatory domain profile.
1040 1156 InterPro IPR001789 Signal transduction response regulator, receiver domain
190 217 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
47 464 ProSiteProfiles PS50283 Sodium:solute symporter family profile.
47 464 InterPro IPR001734 Sodium/solute symporter
854 1017 SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
854 1017 InterPro IPR036890 Histidine kinase/HSP90-like ATPase superfamily
28 38 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
1042 1142 CDD cd00156 REC
978 996 PRINTS PR00344 Bacterial sensor protein C-terminal signature
978 996 InterPro IPR004358 Signal transduction histidine kinase-related protein, C-terminal
1002 1015 PRINTS PR00344 Bacterial sensor protein C-terminal signature
1002 1015 InterPro IPR004358 Signal transduction histidine kinase-related protein, C-terminal
943 957 PRINTS PR00344 Bacterial sensor protein C-terminal signature
943 957 InterPro IPR004358 Signal transduction histidine kinase-related protein, C-terminal
961 971 PRINTS PR00344 Bacterial sensor protein C-terminal signature
961 971 InterPro IPR004358 Signal transduction histidine kinase-related protein, C-terminal
1 5 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
796 860 CDD cd00082 HisKA
796 860 InterPro IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
179 189 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
805 1018 ProSiteProfiles PS50109 Histidine kinase domain profile.
805 1018 InterPro IPR005467 Histidine kinase domain
88 114 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
908 1018 SMART SM00387 HKATPase_4
908 1018 InterPro IPR003594 Histidine kinase/HSP90-like ATPase
403 413 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
798 864 SMART SM00388 HisKA_10
798 864 InterPro IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
115 134 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
329 351 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
6 27 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
135 160 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
384 403 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
382 402 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
798 864 Pfam PF00512 His Kinase A (phospho-acceptor) domain
866 1019 FunFam G3DSA:3.30.565.10:FF:000049 Two-component sensor histidine kinase
241 261 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
909 1017 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
909 1017 InterPro IPR003594 Histidine kinase/HSP90-like ATPase
1037 1157 SUPERFAMILY SSF52172 CheY-like
1037 1157 InterPro IPR011006 CheY-like superfamily
328 361 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
1035 1159 Gene3D G3DSA:3.40.50.2300 -
27 549 FunFam G3DSA:1.20.1730.10:FF:000022 Sensor histidine kinase
413 435 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
781 865 SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase
781 865 InterPro IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily
764 798 Coils Coil Coil
262 281 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
34 561 Gene3D G3DSA:1.20.1730.10 Sodium/glucose cotransporter
34 561 InterPro IPR038377 Sodium/glucose symporter superfamily
282 308 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
150 1156 PANTHER PTHR43047 TWO-COMPONENT HISTIDINE PROTEIN KINASE
436 441 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
1039 1152 SMART SM00448 REC_2
1039 1152 InterPro IPR001789 Signal transduction response regulator, receiver domain
115 134 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
7 511 CDD cd10322 SLC5sbd
39 60 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

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Structural evidence

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Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA3271
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
4 0.756
1 0.692
5 0.348
2 0.206

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

52 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
ANP P0AE82 506.2 Da LogP -2.06 TPSA 281.9 3 viol. ✓ Clean c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)…
PG0 P71815 120.1 Da LogP -0.36 TPSA 38.7 ✓ Ro5 ✓ Clean COCCOCCO

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.