Amino acids
107
Annotations
3
Features
9
PDB binders
0
Overview
Basic information about this protein and its source genome.
- Accession
- PA3351
- Gene
- PA3351 flgM
- Status
- annotated
- Amino acids
- 107
- Structure source
- AlphaFold
GO
GO:0016989 The function of binding to a sigma factor and stopping, preventing or reducing the rate of its transcriptional activity.
GO:0044781 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a bacterial-type flagellum, a motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope which functions in cell motility.
GO:0045892 Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
Target profile
Computed evidence for target prioritization.
- Human off-target
- No hit
- Gut microbiome off-target
- hit
- Essential (DEG)
- N
- Localization
- Extracellular
Sequence
Primary amino-acid sequence viewer.
Functional Annotations
Enzyme classification and Gene Ontology terms linked to this protein.
3 GO
Gene Ontology (GO)
3- GO:0016989 The function of binding to a sigma factor and stopping, preventing or reducing the rate of its transcriptional activity.
- GO:0044781 A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a bacterial-type flagellum, a motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope which functions in cell motility.
- GO:0045892 Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.
Sequence Features
Domain/signature hits from InterPro and related databases.
9 records
Show feature table
| Start | End | DB | Term | Name |
|---|---|---|---|---|
| 1 | 58 | MobiDBLite | mobidb-lite | consensus disorder prediction |
| 49 | 102 | Pfam | PF04316 | Anti-sigma-28 factor, FlgM |
| 49 | 102 | InterPro | IPR031316 | Anti-sigma-28 factor FlgM, C-terminal |
| 5 | 104 | SUPERFAMILY | SSF101498 | Anti-sigma factor FlgM |
| 5 | 104 | InterPro | IPR035890 | Anti-sigma-28 factor FlgM superfamily |
| 42 | 58 | MobiDBLite | mobidb-lite | consensus disorder prediction |
| 9 | 24 | MobiDBLite | mobidb-lite | consensus disorder prediction |
| 5 | 104 | NCBIfam | TIGR03824 | flagellar biosynthesis anti-sigma factor FlgM |
| 5 | 104 | InterPro | IPR007412 | Anti-sigma-28 factor, FlgM |
3D Structure
Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.
No pockets are loaded yet for the displayed AlphaFold model PA3351 structure. Run experimental pocket backfill to show FPocket/P2Rank overlays on this structure.
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Structural evidence
0 + 1Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.
| Entry | Method | Resolution | Chain | Coverage | Links | Status |
|---|---|---|---|---|---|---|
|
AlphaFold
PA3351
|
AlphaFold | — | — | full sequence | — | Viewing |