Protein profile

PA3440a

type III effector protein

Genome: NC_002516.2

Gene: YP_008719767.1 Structure source: ColabFold
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Amino acids 112
Annotations 0
Features 4
PDB binders 0
Druggability 0.357

Overview

Basic information about this protein and its source genome.

Accession
PA3440a
Assembly
Pseudomonas aeruginosa PAO1, complete genome
Gene
YP_008719767.1
Status
annotated
Amino acids
112
Structure source
ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Unknown

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.357
Structure –
Pocket –

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

4 records
Show feature table
Start End DB Term Name
4 108 Pfam PF08888 HopJ type III effector protein
4 108 InterPro IPR014984 HopJ type III effector protein
1 110 Gene3D G3DSA:3.20.160.10 vpa0580 domain like
1 110 InterPro IPR038604 Type III effector HopJ superfamily

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
ColabFold PA3440A
ColabFold — — full sequence — Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.357
2 0.242