Protein profile

PA3467

major facilitator superfamily transporter

Genome: NC_002516.2

Gene: PA3467 Structure source: AlphaFold UniProt Q9HYD9
Amino acids 455
Annotations 3
Features 50
PDB binders 0
Druggability 0.651

Overview

Basic information about this protein and its source genome.

Accession
PA3467
Gene
PA3467
Status
annotated
Amino acids
455
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
32.847
Human E-value
6.96e-07
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
CytoplasmicMembrane

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.651
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

3 GO

Gene Ontology (GO)

3
  • GO:0016020 A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
  • GO:0022857 Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.
  • GO:0055085 The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.

Sequence Features

Domain/signature hits from InterPro and related databases.

50 records
Show feature table
Start End DB Term Name
115 136 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
10 452 SUPERFAMILY SSF103473 MFS general substrate transporter
10 452 InterPro IPR036259 MFS transporter superfamily
418 422 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
148 170 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
329 351 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
378 397 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
268 290 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
47 57 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
176 197 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
300 322 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
266 288 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
90 109 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
444 455 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
114 136 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
289 299 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
79 89 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
25 440 CDD cd17316 MFS_SV2_like
398 417 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
24 446 ProSiteProfiles PS50850 Major facilitator superfamily (MFS) profile.
24 446 InterPro IPR020846 Major facilitator superfamily domain
25 47 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
120 145 ProSitePatterns PS00217 Sugar transport proteins signature 2.
120 145 InterPro IPR005829 Sugar transporter, conserved site
23 46 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
1 22 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
198 265 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
175 197 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
60 82 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
423 443 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
17 451 PANTHER PTHR23508 CARBOXYLIC ACID TRANSPORTER PROTEIN HOMOLOG
17 454 Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains
17 454 InterPro IPR036259 MFS transporter superfamily
421 443 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
137 147 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
347 351 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
329 346 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
323 328 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
78 94 ProSitePatterns PS00216 Sugar transport proteins signature 1.
78 94 InterPro IPR005829 Sugar transporter, conserved site
110 114 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
300 322 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
171 175 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
355 377 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
58 78 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
148 170 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
352 377 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
398 417 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
56 453 Pfam PF00083 Sugar (and other) transporter
56 453 InterPro IPR005828 Major facilitator, sugar transporter-like

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA3467
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.544
10 0.254

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

77 records

Bioactivity inferred from similar proteins in ChEMBL. Score = pchembl (−log Ki/IC₅₀; higher = more potent).

Show only:
Ligand UniProt (homolog) pchembl MW · LogP · TPSA Lipinski PAINS SMILES
CHEMBL376503 Q8VC69 7.05 647.9 Da LogP 7.02 TPSA 87.7 2 viol. ✓ Clean O=C(O)c1ccccc1-c1c2cc(Br)c(=O)c(Br)c-2oc2c(Br)c…
CHEMBL790 O15245 6.68 505.5 Da LogP 4.18 TPSA 167.6 2 viol. ✓ Clean N=C(NCCCCCCNC(=N)NC(=N)Nc1ccc(Cl)cc1)NC(=N)Nc1c…
QI9 O08966 6.55 324.4 Da LogP 3.17 TPSA 45.6 ✓ Ro5 ✓ Clean COc1ccc2c(c1)c(ccn2)[C@H]([C@@H]3C[C@@H]4CC[N@]…
CHEMBL2075007 O35956 6.40 267.4 Da LogP 1.60 TPSA 55.4 ✓ Ro5 ✓ Clean COC(=O)[C@@H](CSCc1ccccc1)NC(C)=O
0L1 Q8VC69 6.39 146.1 Da LogP 0.72 TPSA 74.6 ✓ Ro5 ✓ Clean C(CCC(=O)O)CC(=O)O
CHEMBL571 O35956 6.30 254.3 Da LogP 3.11 TPSA 54.4 ✓ Ro5 ✓ Clean CC(C(=O)O)c1cccc(C(=O)c2ccccc2)c1
CLU O15245 6.26 230.1 Da LogP 2.17 TPSA 36.4 ✓ Ro5 ✓ Clean c1cc(c(c(c1)Cl)N=C2NCCN2)Cl
CHEMBL30 O08966 6.23 252.3 Da LogP 0.60 TPSA 88.9 ✓ Ro5 Alert CN/C(=N\CCSCc1nc[nH]c1C)NC#N
CHEMBL4062501 O15245 6.05 191.3 Da LogP 1.89 TPSA 64.4 ✓ Ro5 ✓ Clean CC(C)(C)c1ccc(N=C(N)N)cc1
CHEMBL1197556 O15245 6.01 327.5 Da LogP 5.04 TPSA 7.1 1 viol. Alert CCN1/C(=C/c2ccc3ccccc3[n+]2CC)C=Cc2ccccc21
7BA O15245 316.4 Da LogP 3.60 TPSA 57.2 ✓ Ro5 ✓ Clean COc1ccc(cc1O)/C=C\c2cc(c(c(c2)OC)OC)OC
CHEMBL1201195 Q8VC69 471.5 Da LogP -0.73 TPSA 163.3 1 viol. ✓ Clean CO[C@@]1(NC(=O)CSCC#N)C(=O)N2C(C(=O)O)=C(CSc3nn…
CHEMBL1206 O15245 312.5 Da LogP 5.02 TPSA 6.5 1 viol. Alert CCN(CC)C(C)CN1c2ccccc2Sc2ccccc21
CHEMBL1214 Q8VC69 378.4 Da LogP 0.49 TPSA 124.0 ✓ Ro5 ✓ Clean CC1(C)S[C@@H]2[C@H](NC(=O)C(C(=O)O)c3ccccc3)C(=…
CHEMBL172513 O76082 161.2 Da LogP -1.81 TPSA 60.4 ✓ Ro5 ✓ Clean C[N+](C)(C)CC(O)CC(=O)[O-]
CHEMBL21640 O15245 223.3 Da LogP 3.12 TPSA 12.0 ✓ Ro5 ✓ Clean c1ccc(CC2NCCc3ccccc32)cc1
CHEMBL2425619 O15245 218.1 Da LogP -1.11 TPSA 0.0 ✓ Ro5 ✓ Clean C[14CH2][N+]([14CH2]C)([14CH2]C)[14CH2]C.[Br-]
CHEMBL4077758 O76082 534.5 Da LogP -1.61 TPSA 180.1 2 viol. ✓ Clean C[N+](C)(C)CC(CC(=O)[O-])OC(=O)CCCCC(=O)Nc1ccn(…
CHEMBL4085610 O76082 590.6 Da LogP -0.05 TPSA 180.1 2 viol. ✓ Clean C[N+](C)(C)CC(CC(=O)[O-])OC(=O)CCCCCCCCC(=O)Nc1…
CHEMBL4095790 O76082 506.5 Da LogP -2.39 TPSA 180.1 2 viol. ✓ Clean C[N+](C)(C)CC(CC(=O)[O-])OC(=O)CCC(=O)Nc1ccn([C…
CHEMBL4103546 O76082 562.6 Da LogP -0.83 TPSA 180.1 2 viol. ✓ Clean C[N+](C)(C)CC(CC(=O)[O-])OC(=O)CCCCCCC(=O)Nc1cc…
CHEMBL461101 O15245 442.5 Da LogP 4.56 TPSA 114.6 ✓ Ro5 Alert CC1=NN(c2ccc(C)c(C)c2)C(=O)/C1=N\Nc1cccc(-c2ccc…
CHEMBL893 Q8VC69 470.3 Da LogP 3.20 TPSA 112.7 ✓ Ro5 ✓ Clean Cc1onc(-c2c(Cl)cccc2Cl)c1C(=O)N[C@@H]1C(=O)N2[C…
CHEMBL897 Q8VC69 285.4 Da LogP 2.20 TPSA 74.7 ✓ Ro5 ✓ Clean CCCN(CCC)S(=O)(=O)c1ccc(C(=O)O)cc1
CHEMBL9324 O15245 130.3 Da LogP 1.88 TPSA 0.0 ✓ Ro5 ✓ Clean CC[N+](CC)(CC)CC
THA O15245 198.3 Da LogP 2.70 TPSA 38.9 ✓ Ro5 ✓ Clean c1ccc2c(c1)c(c3c(n2)CCCC3)N
WPP Q8VC69 517.6 Da LogP -0.24 TPSA 156.4 1 viol. ✓ Clean CCN1CCN(C(=O)C1=O)C(=O)N[C@H](c2ccccc2)C(=O)N[C…

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.