Protein profile

PA4334

manganese transporter MntH

Genome: NC_002516.2

Gene: mntH1 PA4334 Structure source: AlphaFold UniProt Q9RPF3
Amino acids 418
Annotations 6
Features 58
PDB binders 3
Druggability 0.773

Overview

Basic information about this protein and its source genome.

Accession
PA4334
Gene
mntH1 PA4334
Status
annotated
Amino acids
418
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
42.636
Human E-value
1.78e-14
Gut microbiome off-target
hit
Essential (DEG)
Y
Localization
CytoplasmicMembrane

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.773
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

6 GO

Gene Ontology (GO)

6
  • GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
  • GO:0046872 Binding to a metal ion.
  • GO:0046873 Enables the transfer of metal ions from one side of a membrane to the other.
  • GO:0015293 Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.
  • GO:0016020 A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
  • GO:0030001 The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

Sequence Features

Domain/signature hits from InterPro and related databases.

58 records
Show feature table
Start End DB Term Name
1 12 Phobius SIGNAL_PEPTIDE_N_REGION N-terminal region of a signal peptide.
11 385 NCBIfam TIGR01197 metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family
11 385 InterPro IPR001046 NRAMP family
24 28 Phobius SIGNAL_PEPTIDE_C_REGION C-terminal region of a signal peptide.
141 151 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
213 237 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
301 330 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
29 43 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
13 23 Phobius SIGNAL_PEPTIDE_H_REGION Hydrophobic region of a signal peptide.
121 140 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
355 376 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
193 212 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
282 300 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
152 174 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
13 28 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
377 395 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
151 173 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
194 212 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
418 418 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
277 299 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
116 120 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
396 417 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
350 354 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
4 417 Hamap MF_00221 Divalent metal cation transporter MntH [mntH].
4 417 InterPro IPR001046 NRAMP family
91 115 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
240 262 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
43 65 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
329 346 PRINTS PR00447 Natural resistance-associated macrophage protein signature
329 346 InterPro IPR001046 NRAMP family
301 320 PRINTS PR00447 Natural resistance-associated macrophage protein signature
301 320 InterPro IPR001046 NRAMP family
361 380 PRINTS PR00447 Natural resistance-associated macrophage protein signature
361 380 InterPro IPR001046 NRAMP family
197 220 PRINTS PR00447 Natural resistance-associated macrophage protein signature
197 220 InterPro IPR001046 NRAMP family
120 139 PRINTS PR00447 Natural resistance-associated macrophage protein signature
120 139 InterPro IPR001046 NRAMP family
92 118 PRINTS PR00447 Natural resistance-associated macrophage protein signature
92 118 InterPro IPR001046 NRAMP family
145 166 PRINTS PR00447 Natural resistance-associated macrophage protein signature
145 166 InterPro IPR001046 NRAMP family
9 413 PANTHER PTHR11706 SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER
9 413 InterPro IPR001046 NRAMP family
33 390 Pfam PF01566 Natural resistance-associated macrophage protein
33 390 InterPro IPR001046 NRAMP family
263 281 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
117 139 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
71 90 Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.
175 193 Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.
331 349 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
18 382 NCBIfam NF037982 Nramp family divalent metal transporter
331 353 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
238 262 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.
1 28 Phobius SIGNAL_PEPTIDE Signal peptide region
395 417 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
91 113 TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane.
44 70 Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane.

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA4334
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
4 0.773
8 0.502
10 0.448
1 0.375

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

85 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
DMU E4KPW4 482.6 Da LogP -1.23 TPSA 178.5 2 viol. ✓ Clean CCCCCCCCCCO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)C…
NJZ E4KPW4 333.3 Da LogP 2.70 TPSA 99.7 ✓ Ro5 ✓ Clean [H]/N=C(\SCc1cc(cc(c1)CS/C(=N/[H])/N)Br)/N
OLC Q9RTP8 356.5 Da LogP 4.92 TPSA 66.8 ✓ Ro5 ✓ Clean CCCCCCCC\C=C/CCCCCCCC(=O)OC[C@@H](CO)O

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.