Protein profile

PA4481

rod shape-determining protein MreB

Genome: NC_002516.2

Gene: mreB PA4481 Structure source: AlphaFold UniProt Q9HVU0
Amino acids 345
Annotations 7
Features 28
PDB binders 11
Druggability 0.77

Overview

Basic information about this protein and its source genome.

Accession
PA4481
Gene
mreB PA4481
Status
annotated
Amino acids
345
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
28.571
Human E-value
1.14e-07
Gut microbiome off-target
hit
Essential (DEG)
Y
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.77
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

MFKKLRGMFSSDLSIDLGTANTLIYVRERGIVLNEPSVVAIRSHGSQKSVVAVGTEAKRMLGRTPGNIAAIRPMKDGVIADFSVCEKMLQYFINKVHENSFLQPSPRVLICVPCKSTQVERRAIRESALGAGAREVFLIEEPMAAAIGAGLPVEEARGSMVVDIGGGTTEIALISLNGVVYAESVRVGGDRFDEAIVTYVRRNYGSLIGESTAERIKQEIGTAFPGGDVREVDVRGRNLAEGVPRSFTLNSNEVLEALQESLATIVQAVKSALEQSPPELASDIAERGLVLTGGGALLRDLDKLLAQETGLPVIVAEEPLTCVARGGGRALEMMDRHSMDLLSTE

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

7 GO

Gene Ontology (GO)

7
  • GO:0005737 The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
  • GO:0005856 A cellular structure that forms the internal framework of eukaryotic and prokaryotic cells. The cytoskeleton includes intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
  • GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
  • GO:0005524 Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
  • GO:0000902 The developmental process in which the size or shape of a cell is generated and organized.
  • GO:0043093 A cytokinesis process that involves a set of conserved proteins including FtsZ, and results in the formation of two similarly sized and shaped cells.
  • GO:0008360 Any process that modulates the surface configuration of a cell.

Sequence Features

Domain/signature hits from InterPro and related databases.

28 records
Show feature table
Start End DB Term Name
9 150 SUPERFAMILY SSF53067 Actin-like ATPase domain
9 150 InterPro IPR043129 ATPase, nucleotide binding domain
50 68 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature
50 68 InterPro IPR004753 Cell shape determining protein MreB
134 153 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature
134 153 InterPro IPR004753 Cell shape determining protein MreB
70 93 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature
70 93 InterPro IPR004753 Cell shape determining protein MreB
302 328 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature
302 328 InterPro IPR004753 Cell shape determining protein MreB
189 209 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature
189 209 InterPro IPR004753 Cell shape determining protein MreB
10 342 Hamap MF_02207 Cell shape-determining protein MreB [mreB].
10 342 InterPro IPR004753 Cell shape determining protein MreB
9 338 NCBIfam TIGR00904 MreB/Mrl family cell shape determining protein
9 338 InterPro IPR004753 Cell shape determining protein MreB
151 340 SUPERFAMILY SSF53067 Actin-like ATPase domain
151 340 InterPro IPR043129 ATPase, nucleotide binding domain
11 337 Pfam PF06723 MreB/Mbl protein
13 335 CDD cd10225 MreB_like
13 335 InterPro IPR004753 Cell shape determining protein MreB
161 232 Gene3D G3DSA:3.30.420.40 -
233 319 Gene3D G3DSA:3.30.420.40 -
160 242 FunFam G3DSA:3.30.420.40:FF:000016 Rod shape-determining protein mreB
8 160 Gene3D G3DSA:3.30.420.40 -
255 275 Coils Coil Coil
2 339 PANTHER PTHR42749 CELL SHAPE-DETERMINING PROTEIN MREB
8 159 FunFam G3DSA:3.30.420.40:FF:000014 Rod shape-determining protein MreB

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA4481
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.397
2 0.273

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

161 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
3BH P11021 282.3 Da LogP -2.40 TPSA 165.6 ✓ Ro5 ✓ Clean c1nc(c2c(n1)n(c(n2)N)[C@H]3[C@@H]([C@@H]([C@H](…
3FD P11021 556.4 Da LogP 3.04 TPSA 164.4 2 viol. ✓ Clean c1cc(ccc1COCC2C(C(C(O2)n3c4c(c(ncn4)N)nc3NCc5cc…
7DD P11021 426.2 Da LogP -1.14 TPSA 219.7 2 viol. ✓ Clean c1cn(c2c1c(ncn2)N)[C@H]3[C@@H]([C@@H]([C@H](O3)…
7DT P11021 506.2 Da LogP -1.02 TPSA 266.2 3 viol. ✓ Clean c1cn(c2c1c(ncn2)N)[C@H]3[C@@H]([C@@H]([C@H](O3)…
ACP P11021 505.2 Da LogP -1.52 TPSA 269.9 3 viol. ✓ Clean c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)…
ANP A0A0H3C7V4 506.2 Da LogP -2.06 TPSA 281.9 3 viol. ✓ Clean c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)…
DAT P11021 411.2 Da LogP -0.72 TPSA 212.4 1 viol. ✓ Clean c1nc(c2c(n1)n(cn2)[C@H]3C[C@@H]([C@H](O3)CO[P@]…
DTP P11021 491.2 Da LogP -0.60 TPSA 258.9 2 viol. ✓ Clean c1nc(c2c(n1)n(cn2)[C@H]3C[C@@H]([C@H](O3)CO[P@]…
GBA P11021 346.1 Da LogP -1.22 TPSA 139.5 ✓ Ro5 ✓ Clean c1nc(c2c(n1)n(c(n2)Br)[C@H]3[C@@H]([C@@H]([C@H]…
H5V P11021 280.3 Da LogP -0.98 TPSA 126.7 ✓ Ro5 ✓ Clean C[C@]1([C@@H]([C@H](O[C@H]1n2ccc3c2ncnc3N)CO)O)O
HFY P11021 406.8 Da LogP 0.29 TPSA 151.6 ✓ Ro5 ✓ Clean c1ccc(c(c1)CNc2nc3c(ncnc3n2[C@H]4[C@@H]([C@@H](…

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.