Protein profile

PA4511

hypothetical protein

Genome: NC_002516.2

Gene: pxpA3 PA4511 Structure source: Experimental + AlphaFold UniProt Q9HVR0
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Amino acids 251
Annotations 4
Features 10
PDB binders 0
Druggability 0.875

Overview

Basic information about this protein and its source genome.

Accession
PA4511
Assembly
Pseudomonas aeruginosa PAO1, complete genome
Gene
pxpA3 PA4511
Status
annotated
Amino acids
251
Structure source
Experimental + AlphaFold
EC
3.5.2.9
GO
GO:0017168 Catalysis of the reaction: 5-oxo-L-proline + ATP + 2 H2O = L-glutamate + ADP + 2 H+ + phosphate. GO:0005524 Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. GO:0005975 The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.875
Structure –
Pocket –

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 EC 3 GO

Enzyme Commission (EC)

1

Gene Ontology (GO)

3
  • GO:0017168 Catalysis of the reaction: 5-oxo-L-proline + ATP + 2 H2O = L-glutamate + ADP + 2 H+ + phosphate.
  • GO:0005524 Binding to ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
  • GO:0005975 The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.

Sequence Features

Domain/signature hits from InterPro and related databases.

10 records
Show feature table
Start End DB Term Name
8 248 CDD cd10787 LamB_YcsF_like
6 249 PANTHER PTHR30292 UNCHARACTERIZED PROTEIN YBGL-RELATED
6 249 InterPro IPR005501 LamB/YcsF/PxpA-like
7 251 Hamap MF_00691 5-oxoprolinase subunit A [pxpA].
7 251 InterPro IPR005501 LamB/YcsF/PxpA-like
7 249 SUPERFAMILY SSF88713 Glycoside hydrolase/deacetylase
7 249 InterPro IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel
8 249 Pfam PF03746 LamB/YcsF family
8 249 InterPro IPR005501 LamB/YcsF/PxpA-like
1 251 Gene3D G3DSA:3.20.20.370 Glycoside hydrolase/deacetylase

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

1 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
PDB 2XU2
X-ray 2.30 Å A
99.6% 2-251
PDBe RCSB PDBj File
Viewing
AlphaFold PA4511
AlphaFold — — full sequence — Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
2 0.875
6 0.674
3 0.529

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 10.79 0.579