Protein profile

PA4645

hypoxanthine-guanine phosphoribosyltransferase

Genome: NC_002516.2

Gene: PA4645 Structure source: AlphaFold UniProt Q9HVE7
Amino acids 185
Annotations 7
Features 10
PDB binders 20

Overview

Basic information about this protein and its source genome.

Accession
PA4645
Gene
PA4645
Status
annotated
Amino acids
185
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
26.347
Human E-value
5.66e-13
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Cytoplasmic

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

7 GO

Gene Ontology (GO)

7
  • GO:0005829 The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
  • GO:0004422 Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate.
  • GO:0000287 Binding to a magnesium (Mg) ion.
  • GO:0032263 Any process which produces guanosine monophosphate from derivatives of it, without de novo synthesis.
  • GO:0006178 Any process that generates guanine, 2-amino-6-hydroxypurine, from derivatives of it without de novo synthesis.
  • GO:0046100 The chemical reactions and pathways involving hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate.
  • GO:0032264 Any process which produces inosine monophosphate from derivatives of it, without de novo synthesis.

Sequence Features

Domain/signature hits from InterPro and related databases.

10 records
Show feature table
Start End DB Term Name
27 143 CDD cd06223 PRTases_typeI
27 143 InterPro IPR000836 Phosphoribosyltransferase domain
2 184 Gene3D G3DSA:3.40.50.2020 -
2 184 InterPro IPR029057 Phosphoribosyltransferase-like
2 184 FunFam G3DSA:3.40.50.2020:FF:000041 Hypoxanthine-guanine phosphoribosyltransferase
15 182 PANTHER PTHR43340 HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE
18 145 Pfam PF00156 Phosphoribosyl transferase domain
18 145 InterPro IPR000836 Phosphoribosyltransferase domain
14 183 SUPERFAMILY SSF53271 PRTase-like
14 183 InterPro IPR029057 Phosphoribosyltransferase-like

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA4645
AlphaFold full sequence Viewing

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

142 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
1RP P00492 369.2 Da LogP -2.79 TPSA 194.4 ✓ Ro5 ✓ Clean C1=C(N=C(C(=O)N1[C@H]2[C@@H]([C@@H]([C@H](O2)CO…
24H P00492 319.2 Da LogP -1.79 TPSA 176.6 ✓ Ro5 ✓ Clean c1nc2c(n1C[C@@H](CO)OCP(=O)(O)O)N=C(NC2=O)N
25H P00492 303.2 Da LogP -1.10 TPSA 156.4 ✓ Ro5 ✓ Clean c1nc2c(n1CCOCCP(=O)(O)O)N=C(NC2=O)N
3L3 P00492 529.2 Da LogP 0.08 TPSA 217.1 2 viol. ✓ Clean C(CN(CCO/C=C/P(=O)(O)O)/C=C/P(=O)(O)O)n1c2c(nc1…
3L4 P00492 438.3 Da LogP -1.20 TPSA 217.1 1 viol. ✓ Clean c1nc2c(n1CCN(CCOCP(=O)(O)O)/C=C/P(=O)(O)O)N=C(N…
3L6 P00492 359.3 Da LogP -1.47 TPSA 176.4 ✓ Ro5 ✓ Clean c1nc2c(n1CCN(CCCN)CCP(=O)(O)O)N=C(NC2=O)N
3L7 P00492 437.3 Da LogP -0.74 TPSA 191.1 ✓ Ro5 ✓ Clean c1nc2c(n1CCN(CCO/C=C/P(=O)(O)O)CCP(=O)(O)O)N=CN…
3L8 P00492 425.3 Da LogP -1.25 TPSA 191.1 ✓ Ro5 ✓ Clean c1nc2c(n1CCN(CCOCP(=O)(O)O)CCP(=O)(O)O)N=CNC2=O
4X2 P00492 318.2 Da LogP -1.33 TPSA 150.6 ✓ Ro5 ✓ Clean c1nc2c(n1C[C@@H](CO)OCCP(=O)(O)O)N=CNC2=O
4X7 P00492 333.2 Da LogP -1.74 TPSA 176.6 ✓ Ro5 ✓ Clean c1nc2c(n1C[C@@H](CO)OCCP(=O)(O)O)N=C(NC2=O)N
5GP Q5SLS3 363.2 Da LogP -2.57 TPSA 206.0 1 viol. ✓ Clean c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O…
9YP P00492 441.3 Da LogP -1.34 TPSA 223.1 1 viol. ✓ Clean c1nc2c(n1C[C@H](COCCP(=O)(O)O)COCP(=O)(O)O)N=C(…
G4P B9ZW32 603.2 Da LogP -2.22 TPSA 345.6 3 viol. ✓ Clean c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O…
H26 P00492 288.2 Da LogP -0.69 TPSA 130.3 ✓ Ro5 ✓ Clean c1nc2c(n1CCOCCP(=O)(O)O)N=CNC2=O
IMP Q5SLS3 348.2 Da LogP -2.15 TPSA 180.0 ✓ Ro5 ✓ Clean c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O…
IMU P00492 361.3 Da LogP -2.32 TPSA 206.8 1 viol. ✓ Clean c1c(c2c([nH]1)C(=O)NC(=N2)N)[C@H]3[C@@H]([C@@H]…
POP P00492 176.0 Da LogP -2.08 TPSA 129.9 ✓ Ro5 ✓ Clean O[P@@](=O)([O-])O[P@@](=O)(O)[O-]
SV2 P00492 427.2 Da LogP -1.38 TPSA 223.1 1 viol. ✓ Clean c1nc2c(n1CC(COCP(=O)(O)O)COCP(=O)(O)O)NC(=NC2=O…
WPG P00492 496.3 Da LogP -2.47 TPSA 254.4 1 viol. ✓ Clean c1nc2c(n1[C@@H]3CN(C[C@H]3OC[C@H](O)P(=O)(O)O)C…
YPG P00492 496.3 Da LogP -2.47 TPSA 254.4 1 viol. ✓ Clean c1nc2c(n1[C@@H]3CN(C[C@H]3OC[C@@H](O)P(=O)(O)O)…

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.