Protein profile

PA4709

hemin degrading factor

Genome: NC_002516.2

Gene: PA4709 Structure source: AlphaFold UniProt Q9HV89
Amino acids 354
Annotations 2
Features 9
PDB binders 0
Druggability 0.518

Overview

Basic information about this protein and its source genome.

Accession
PA4709
Gene
PA4709
Status
annotated
Amino acids
354
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.518
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

2 GO

Gene Ontology (GO)

2
  • GO:0020037 Binding to a heme, a compound composed of iron complexed in a porphyrin (tetrapyrrole) ring.
  • GO:0006826 The directed movement of iron (Fe) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

Sequence Features

Domain/signature hits from InterPro and related databases.

9 records
Show feature table
Start End DB Term Name
197 350 CDD cd16831 HemS-like_C
91 346 Gene3D G3DSA:3.40.1570.10 HemS/ChuS/ChuX like domains
14 167 CDD cd16830 HemS-like_N
220 351 Pfam PF05171 Haemin-degrading HemS.ChuX domain
220 351 InterPro IPR007845 Haemin-degrading HemS/ChuX domain
38 167 Pfam PF05171 Haemin-degrading HemS.ChuX domain
38 167 InterPro IPR007845 Haemin-degrading HemS/ChuX domain
14 351 SUPERFAMILY SSF144064 Heme iron utilization protein-like
18 294 Gene3D G3DSA:3.40.1570.10 HemS/ChuS/ChuX like domains

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

Legend High Medium Low

Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA4709
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.518
2 0.368