Protein profile

PA4732

glucose-6-phosphate isomerase

Genome: NC_002516.2

Gene: PA4732 pgi Structure source: AlphaFold UniProt Q9HV67
Amino acids 554
Annotations 9
Features 35
PDB binders 9
Druggability 0.682

Overview

Basic information about this protein and its source genome.

Accession
PA4732
Gene
PA4732 pgi
Status
annotated
Amino acids
554
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
52.632
Human E-value
4.22e-15
Gut microbiome off-target
hit
Essential (DEG)
Y
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.682
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

MKHHLTPLDATQLDSWRALAAHRQELQDFRMRQAFIDDPERFKRFSFSACGLFLDFSKNLIRQDTIDLLVKLAEEARLSDAIRAMFDGEAINASERRPVLHTALRRPIGDKVLVDGVDVMPEVHRVLHQMTELVGYVHNGLWRGYTEKPITDVVNIGIGGSFLGPQLVSEALLPFAQKGVRCHYLANIDGSEFHELASRLNAETTLFIVSSKSFGTLETLKNAQAARAWYLAQGGTEEELYRHFIAVSSNKEAAIAFGIREENIFPMWDWVGGRYSLWSAIGLPIAMSIGISNFKELLSGAYNMDQHFQTAPFERNIPVLLGLLGVWYGDFWGANSHAILPYDYYLRNITDHLQQLDMESNGKSVRQDGTPVTSGTGPVIWGGVGCNGQHAYHQLLHQGTQLIPADFIVPVSSYNPVADHHQWLYANCLSQSQALMLGKSREEAEAELRAKGLPEAEVQRLAPHKVIPGNRPSNTLVVERISARRLGALIAMYEHKVYVQSILWGINAFDQWGVELGKELGKGVYSRLVGSEETPAEDASTQGLIDFFRGRHRG

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 EC 8 GO

Enzyme Commission (EC)

1

Gene Ontology (GO)

8
  • GO:0005829 The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
  • GO:0097367 Binding to a carbohydrate derivative.
  • GO:0004347 Catalysis of the reaction: alpha-D-glucose 6-phosphate = beta-D-fructose 6-phosphate.
  • GO:0048029 Binding to a monosaccharide. Monosaccharides are the simplest carbohydrates; they are polyhydroxy aldehydes H[CH(OH)]nC(=O)H or polyhydroxy ketones H[CHOH]nC(=O)[CHOH]mH with three or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides.
  • GO:0006094 The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.
  • GO:0051156 The chemical reactions and pathways involving glucose 6-phosphate, a monophosphorylated derivative of glucose with the phosphate group attached to C-6.
  • GO:0006096 The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
  • GO:1901135 The chemical reactions and pathways involving carbohydrate derivative.

Sequence Features

Domain/signature hits from InterPro and related databases.

35 records
Show feature table
Start End DB Term Name
511 553 Gene3D G3DSA:1.10.1390.10 -
511 553 InterPro IPR023096 Phosphoglucose isomerase, C-terminal
101 295 Gene3D G3DSA:3.40.50.10490 -
269 282 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1.
269 282 InterPro IPR018189 Phosphoglucose isomerase, conserved site
13 551 ProSiteProfiles PS51463 Glucose-6-phosphate isomerase family profile.
13 551 InterPro IPR001672 Phosphoglucose isomerase (PGI)
335 524 CDD cd05016 SIS_PGI_2
335 524 InterPro IPR035482 Phosphoglucose isomerase, SIS domain 2
501 518 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2.
501 518 InterPro IPR018189 Phosphoglucose isomerase, conserved site
124 287 CDD cd05015 SIS_PGI_1
124 287 InterPro IPR035476 Phosphoglucose isomerase, SIS domain 1
9 551 SUPERFAMILY SSF53697 SIS domain
9 551 InterPro IPR046348 SIS domain superfamily
11 549 PANTHER PTHR11469 GLUCOSE-6-PHOSPHATE ISOMERASE
11 549 InterPro IPR001672 Phosphoglucose isomerase (PGI)
55 545 Pfam PF00342 Phosphoglucose isomerase
55 545 InterPro IPR001672 Phosphoglucose isomerase (PGI)
49 528 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi].
49 528 InterPro IPR001672 Phosphoglucose isomerase (PGI)
15 510 Gene3D G3DSA:3.40.50.10490 -
153 172 PRINTS PR00662 Glucose-6-phosphate isomerase signature
153 172 InterPro IPR001672 Phosphoglucose isomerase (PGI)
501 514 PRINTS PR00662 Glucose-6-phosphate isomerase signature
501 514 InterPro IPR001672 Phosphoglucose isomerase (PGI)
469 487 PRINTS PR00662 Glucose-6-phosphate isomerase signature
469 487 InterPro IPR001672 Phosphoglucose isomerase (PGI)
487 501 PRINTS PR00662 Glucose-6-phosphate isomerase signature
487 501 InterPro IPR001672 Phosphoglucose isomerase (PGI)
342 363 PRINTS PR00662 Glucose-6-phosphate isomerase signature
342 363 InterPro IPR001672 Phosphoglucose isomerase (PGI)
265 283 PRINTS PR00662 Glucose-6-phosphate isomerase signature
265 283 InterPro IPR001672 Phosphoglucose isomerase (PGI)
101 295 FunFam G3DSA:3.40.50.10490:FF:000018 Glucose-6-phosphate isomerase

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA4732
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.682
4 0.369

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

61 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
6PG Q9N1E2 276.1 Da LogP -3.38 TPSA 185.0 1 viol. ✓ Clean C([C@H]([C@H]([C@@H]([C@H](C(=O)O)O)O)O)O)OP(=O…
A5P P06745 232.1 Da LogP -2.83 TPSA 147.7 1 viol. ✓ Clean C([C@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O)O
DER P06745 216.1 Da LogP -2.10 TPSA 144.5 ✓ Ro5 ✓ Clean C([C@@H]([C@H](C(=O)O)O)O)OP(=O)(O)O
E4P P06745 200.1 Da LogP -1.98 TPSA 124.3 ✓ Ro5 ✓ Clean C([C@H]([C@H](C=O)O)O)OP(=O)(O)O
G6Q P13377 260.1 Da LogP -3.26 TPSA 164.8 1 viol. ✓ Clean C([C@H]([C@H]([C@@H]([C@H](C=O)O)O)O)O)OP(=O)(O…
O1B P06744 288.2 Da LogP -3.75 TPSA 182.6 1 viol. ✓ Clean C(CNC(=O)[C@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O)N
PA5 Q9N1E2 246.1 Da LogP -2.74 TPSA 164.8 1 viol. ✓ Clean C([C@H]([C@H]([C@@H](C(=O)O)O)O)O)OP(=O)(O)O
PG6 P06744 266.3 Da LogP 0.35 TPSA 55.4 ✓ Ro5 ✓ Clean COCCOCCOCCOCCOCCOC
S6P P06745 262.2 Da LogP -3.47 TPSA 167.9 1 viol. ✓ Clean C([C@@H]([C@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O)…

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.