Target Pathogen

Overview

Basic information about this protein and its source genome.

Accession: PA4831
Assembly: Pseudomonas aeruginosa PAO1, complete genome
Gene: PA4831
Status: annotated
Amino acids: 186
Structure source: AlphaFold

GO

GO:0003700 A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. GO:0000976 Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon. GO:0006355 Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. GO:0003677 Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

Target profile

Computed evidence for target prioritization.

Human off-target: No hit
Gut microbiome off-target: hit
Essential (DEG): N
Localization: Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.799

Structure –

Pocket –

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

4 GO

Gene Ontology (GO)

4

GO:0003700 A transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
GO:0000976 Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
GO:0006355 Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

Sequence Features

Domain/signature hits from InterPro and related databases.

15 records

Show feature table

Start	End	DB	Term	Name
15	59	Pfam	PF00440	Bacterial regulatory proteins, tetR family
15	59	InterPro	IPR001647	DNA-binding HTH domain, TetR-type
52	180	Gene3D	G3DSA:1.10.357.10	Tetracycline Repressor, domain 2
5	51	Gene3D	G3DSA:1.10.10.60	-
1	72	SUPERFAMILY	SSF46689	Homeodomain-like
1	72	InterPro	IPR009057	Homeobox-like domain superfamily
36	59	PRINTS	PR00455	TetR bacterial regulatory protein HTH signature
36	59	InterPro	IPR001647	DNA-binding HTH domain, TetR-type
15	28	PRINTS	PR00455	TetR bacterial regulatory protein HTH signature
15	28	InterPro	IPR001647	DNA-binding HTH domain, TetR-type
9	69	ProSiteProfiles	PS50977	TetR-type HTH domain profile.
9	69	InterPro	IPR001647	DNA-binding HTH domain, TetR-type
5	181	PANTHER	PTHR47506	TRANSCRIPTIONAL REGULATORY PROTEIN
80	180	SUPERFAMILY	SSF48498	Tetracyclin repressor-like, C-terminal domain
80	180	InterPro	IPR036271	Tetracyclin repressor-like, C-terminal domain superfamily

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

Loading 3D structure...

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry	Method	Resolution	Chain	Coverage	Links	Status
AlphaFold PA4831	AlphaFold	—	—	full sequence	—	Viewing

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Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET	Sticks	Spheres	Surfaces	Druggability	Labels	Zoom	Positions
5				0.799
1				0.75
2				0.669
3				0.215

PA4831