Protein profile

PA5058

poly(3-hydroxyalkanoic acid) synthase

Genome: NC_002516.2

Gene: PA5058 phaC2 Structure source: AlphaFold UniProt G3XCZ9 UniProt Q51515
Amino acids 560
Annotations 2
Features 9
PDB binders 0
Druggability 0.731

Overview

Basic information about this protein and its source genome.

Accession
PA5058
Gene
PA5058 phaC2
Status
annotated
Amino acids
560
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.731
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

MREKQESGSVPVPAEFMSAQSAIVGLRGKDLLTTVRSLAVHGLRQPLHSARHLVAFGGQLGKVLLGDTLHQPNPQDARFQDPSWRLNPFYRRTLQAYLAWQKQLLAWIDESNLDCDDRARARFLVALLSDAVAPSNSLINPLALKELFNTGGISLLNGVRHLLEDLVHNGGMPSQVNKTAFEIGRNLATTQGAVVFRNEVLELIQYKPLGERQYAKPLLIVPPQINKYYIFDLSPEKSFVQYALKNNLQVFVISWRNPDAQHREWGLSTYVEALDQAIEVSREITGSRSVNLAGACAGGLTVAALLGHLQVRRQLRKVSSVTYLVSLLDSQMESPAMLFADEQTLESSKRRSYQHGVLDGRDMAKVFAWMRPNDLIWNYWVNNYLLGRQPPAFDILYWNNDNTRLPAAFHGELLDLFKHNPLTRPGALEVSGTAVDLGKVAIDSFHVAGITDHITPWDAVYRSALLLGGQRRFILSNSGHIQSILNPPGNPKACYFENDKLSSDPRAWYYDAKREEGSWWPVWLGWLQERSGELGNPDFNLGSAAHPPLEAAPGTYVHIR

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

2 GO

Gene Ontology (GO)

2
  • GO:0016746 Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
  • GO:0042619 The chemical reactions and pathways resulting in the formation of poly-hydroxybutyrate (PHB), a polymer of beta-hydroxybutyrate and a common storage material of prokaryotic cells.

Sequence Features

Domain/signature hits from InterPro and related databases.

9 records
Show feature table
Start End DB Term Name
205 487 Gene3D G3DSA:3.40.50.1820 alpha/beta hydrolase
205 487 InterPro IPR029058 Alpha/Beta hydrolase fold
66 559 PANTHER PTHR36837 POLY(3-HYDROXYALKANOATE) POLYMERASE SUBUNIT PHAC
201 492 SUPERFAMILY SSF53474 alpha/beta-Hydrolases
201 492 InterPro IPR029058 Alpha/Beta hydrolase fold
75 243 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus
75 243 InterPro IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain
1 560 NCBIfam TIGR01839 class II poly(R)-hydroxyalkanoic acid synthase
1 560 InterPro IPR011287 Poly(R)-hydroxyalkanoic acid synthase, class II

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA5058
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.731