Protein profile

PA5104

hypothetical protein

Genome: NC_002516.2

Gene: PA5104 Structure source: Experimental + AlphaFold UniProt Q9HU79
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Amino acids 196
Annotations 0
Features 10
PDB binders 0
Druggability 0.538

Overview

Basic information about this protein and its source genome.

Accession
PA5104
Assembly
Pseudomonas aeruginosa PAO1, complete genome
Gene
PA5104
Status
annotated
Amino acids
196
Structure source
Experimental + AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Gut microbiome off-target
hit
Essential (DEG)
N
Localization
Unknown

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.538
Structure –
Pocket –

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

10 records
Show feature table
Start End DB Term Name
11 187 Pfam PF05962 HutD
11 187 InterPro IPR010282 Uncharacterised protein family HutD/Ves
22 113 CDD cd20293 cupin_HutD_N
9 117 Gene3D G3DSA:2.60.120.10 Jelly Rolls
9 117 InterPro IPR014710 RmlC-like jelly roll fold
4 190 SUPERFAMILY SSF51182 RmlC-like cupins
4 190 InterPro IPR011051 RmlC-like cupin domain superfamily
3 194 PANTHER PTHR37943 PROTEIN VES
3 194 InterPro IPR010282 Uncharacterised protein family HutD/Ves
118 193 CDD cd20490 cupin_HutD_C

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

1 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
PDB 1YLL
X-ray 1.64 Å A,B,C,D
100.0% 1-196
PDBe RCSB PDBj File
Viewing
AlphaFold PA5104
AlphaFold — — full sequence — Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.538
2 0.242

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 10.58 0.569
2 1.45 0.019
3 1.0 0.005