Protein profile

PA5110

fructose-1,6-bisphosphatase

Genome: NC_002516.2

Gene: PA5110 fbp Structure source: AlphaFold UniProt Q9HU73
Amino acids 336
Annotations 11
Features 31
PDB binders 40
Druggability 0.442

Overview

Basic information about this protein and its source genome.

Accession
PA5110
Gene
PA5110 fbp
Status
annotated
Amino acids
336
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
41.231
Human E-value
1.29e-78
Gut microbiome off-target
hit
Essential (DEG)
Y
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.442
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 EC 10 GO

Enzyme Commission (EC)

1

Gene Ontology (GO)

10
  • GO:0005737 The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
  • GO:0005829 The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
  • GO:0042132 Catalysis of the reaction: D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate.
  • GO:0000287 Binding to a magnesium (Mg) ion.
  • GO:0030388 The chemical reactions and pathways involving fructose 1,6-bisphosphate, also known as FBP. The D enantiomer is a metabolic intermediate in glycolysis and gluconeogenesis.
  • GO:0006002 The chemical reactions and pathways involving fructose 6-phosphate, also known as F6P. The D-enantiomer is an important intermediate in glycolysis, gluconeogenesis, and fructose metabolism.
  • GO:0006000 The chemical reactions and pathways involving fructose, the ketohexose arabino-2-hexulose. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey.
  • GO:0006094 The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol.
  • GO:0005975 The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.
  • GO:0016791 Catalysis of the hydrolysis of a phosphoric monoester, releasing a phosphate.

Sequence Features

Domain/signature hits from InterPro and related databases.

31 records
Show feature table
Start End DB Term Name
1 336 PIRSF PIRSF000904 FBPtase_SBPase
1 336 InterPro IPR000146 Fructose-1,6-bisphosphatase class 1
2 334 SUPERFAMILY SSF56655 Carbohydrate phosphatase
2 198 FunFam G3DSA:3.30.540.10:FF:000006 Fructose-1,6-bisphosphatase class 1
4 334 PANTHER PTHR11556 FRUCTOSE-1,6-BISPHOSPHATASE-RELATED
4 334 InterPro IPR000146 Fructose-1,6-bisphosphatase class 1
151 174 PRINTS PR00115 Fructose-1,6-bisphosphatase signature
151 174 InterPro IPR028343 Fructose-1,6-bisphosphatase
208 235 PRINTS PR00115 Fructose-1,6-bisphosphatase signature
208 235 InterPro IPR028343 Fructose-1,6-bisphosphatase
28 55 PRINTS PR00115 Fructose-1,6-bisphosphatase signature
28 55 InterPro IPR028343 Fructose-1,6-bisphosphatase
310 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature
310 335 InterPro IPR028343 Fructose-1,6-bisphosphatase
182 205 PRINTS PR00115 Fructose-1,6-bisphosphatase signature
182 205 InterPro IPR028343 Fructose-1,6-bisphosphatase
65 91 PRINTS PR00115 Fructose-1,6-bisphosphatase signature
65 91 InterPro IPR028343 Fructose-1,6-bisphosphatase
10 334 CDD cd00354 FBPase
10 334 InterPro IPR000146 Fructose-1,6-bisphosphatase class 1
2 198 Gene3D G3DSA:3.30.540.10 -
201 334 Pfam PF18913 Fructose-1-6-bisphosphatase, C-terminal domain
201 334 InterPro IPR044015 Fructose-1-6-bisphosphatase class 1, C-terminal
4 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp].
4 336 InterPro IPR000146 Fructose-1,6-bisphosphatase class 1
5 196 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain
5 196 InterPro IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal
1 336 PIRSF PIRSF500210 FBPtase
1 336 InterPro IPR028343 Fructose-1,6-bisphosphatase
199 336 Gene3D G3DSA:3.40.190.80 -
199 336 FunFam G3DSA:3.40.190.80:FF:000011 Fructose-1,6-bisphosphatase class 1

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA5110
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
3 0.442

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

190 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
2C1 P09467 506.4 Da LogP 2.66 TPSA 138.5 1 viol. ✓ Clean Cc1cc(sc1CCOC)S(=O)(=O)NC(=O)Nc2cc(cc(n2)NC(=O)…
2T0 P09467 298.3 Da LogP 1.96 TPSA 105.7 ✓ Ro5 ✓ Clean c1cc2c(cc1OP(=O)(O)O)-c3c(sc(n3)N)CC2
2T4 P09467 298.3 Da LogP 1.81 TPSA 105.7 ✓ Ro5 ✓ Clean c1cc2c(c(c1)OCP(=O)(O)O)-c3c(sc(n3)N)C2
2T5 P09467 283.2 Da LogP 2.23 TPSA 79.7 ✓ Ro5 ✓ Clean c1cc2c(c(c1)OCP(=O)(O)O)-c3c(scn3)C2
2T6 P09467 326.3 Da LogP 1.33 TPSA 122.7 ✓ Ro5 ✓ Clean c1cc(c-2c(c1C(=O)N)Cc3c2ncs3)OCP(=O)(O)O
870 P09467 464.3 Da LogP 5.19 TPSA 107.5 1 viol. ✓ Clean COc1cc(c2c(c1)nc(o2)NS(=O)(=O)c3cc(ccc3Cl)Cl)c4…
93V P09467 262.2 Da LogP 2.35 TPSA 97.0 ✓ Ro5 ✓ Clean COc1ccc(cc1)c2c(c(co2)C(=O)O)C(=O)O
93Y P09467 551.5 Da LogP 3.23 TPSA 150.5 1 viol. ✓ Clean c1cc(cc(c1)Cl)S(=O)(=O)NC(=O)NCCCCCCNC(=O)NS(=O…
947 P09467 466.4 Da LogP 4.65 TPSA 88.2 ✓ Ro5 ✓ Clean CCc1cc(ccc1c2ccccc2)S(=O)(=O)NC(=O)Nc3ncc(s3)Br
94D P09467 302.3 Da LogP 1.99 TPSA 109.6 ✓ Ro5 ✓ Clean CC(C)Cc1c(nc(s1)N)c2ccc(o2)P(=O)(O)O
94G P09467 390.6 Da LogP 3.01 TPSA 88.2 ✓ Ro5 ✓ Clean c1cc(ccc1S(=O)(=O)NC(=O)Nc2cc(ccn2)Br)Cl
94J P09467 537.4 Da LogP 2.84 TPSA 150.5 1 viol. ✓ Clean c1cc(cc(c1)Cl)S(=O)(=O)NC(=O)NCCCCCNC(=O)NS(=O)…
94S P09467 448.4 Da LogP 3.62 TPSA 97.4 ✓ Ro5 ✓ Clean CC(C)Cc1cc(ccc1OC)S(=O)(=O)NC(=O)Nc2ncc(s2)Br
94V P09467 396.7 Da LogP 3.07 TPSA 88.2 ✓ Ro5 ✓ Clean c1ccc(c(c1)S(=O)(=O)NC(=O)Nc2ncc(s2)Br)Cl
94Y P09467 431.1 Da LogP 3.72 TPSA 88.2 ✓ Ro5 ✓ Clean c1cc(c(cc1S(=O)(=O)NC(=O)Nc2ncc(s2)Br)Cl)Cl
95D P09467 488.3 Da LogP 1.77 TPSA 145.4 ✓ Ro5 ✓ Clean Cn1cc(c2c1c(ccc2)OCC(=O)N)S(=O)(=O)NC(=O)Nc3ncc…
95G P09467 527.2 Da LogP 4.25 TPSA 115.2 1 viol. ✓ Clean Cn1c(c(c(n1)Cl)Cl)Oc2ccc(cc2)S(=O)(=O)NC(=O)Nc3…
95J P09467 435.3 Da LogP 3.13 TPSA 114.2 ✓ Ro5 ✓ Clean c1cc(sc1c2ccon2)S(=O)(=O)NC(=O)Nc3ncc(s3)Br
95M P09467 424.4 Da LogP 3.68 TPSA 88.2 ✓ Ro5 ✓ Clean CC(C)Cc1ccc(s1)S(=O)(=O)NC(=O)Nc2ncc(s2)Br
95P P09467 481.6 Da LogP 3.89 TPSA 88.2 ✓ Ro5 ✓ Clean c1c(c(sc1S(=O)(=O)NC(=O)Nc2ncc(s2)Br)Cl)Br
95S P09467 440.4 Da LogP 2.97 TPSA 97.4 ✓ Ro5 ✓ Clean Cc1cc(sc1CCOC)S(=O)(=O)NC(=O)Nc2ncc(s2)Br
95V P09467 459.4 Da LogP 3.85 TPSA 101.0 ✓ Ro5 ✓ Clean Cc1nc(cs1)c2ccc(cc2)S(=O)(=O)NC(=O)Nc3ncc(s3)Br
95Y P09467 519.4 Da LogP 2.75 TPSA 109.9 1 viol. ✓ Clean Cc1cc(sc1CCOC)S(=O)(=O)NC(=O)Nc2cc(cc(n2)N3CCOC…
967 P09467 418.3 Da LogP 3.63 TPSA 88.2 ✓ Ro5 ✓ Clean c1ccc2c(c1)c(cs2)S(=O)(=O)NC(=O)Nc3ncc(s3)Br
96A P09467 492.4 Da LogP 2.40 TPSA 152.5 ✓ Ro5 ✓ Clean Cc1cc(sc1CCOC)S(=O)(=O)NC(=O)Nc2cc(cc(n2)NC(=O)…
96D P09467 369.3 Da LogP 1.46 TPSA 134.1 ✓ Ro5 ✓ Clean c1cc(cc(c1)S(=O)(=O)NC(=O)Nc2cnc(cn2)C#N)OC(F)F
96G O00757 474.4 Da LogP 4.15 TPSA 97.4 ✓ Ro5 ✓ Clean COc1ccc(cc1)c2ccc(s2)S(=O)(=O)NC(=O)Nc3ncc(s3)Br
96J P09467 390.3 Da LogP 3.03 TPSA 88.2 ✓ Ro5 ✓ Clean Cc1cccc(c1)S(=O)(=O)NC(=O)Nc2c(c(ns2)C)Br
A37 P09467 377.6 Da LogP 4.59 TPSA 72.2 ✓ Ro5 ✓ Clean c1cc2c(cc1Cl)nc(o2)NS(=O)(=O)c3cc(ccc3Cl)Cl
A74 P09467 480.3 Da LogP 5.01 TPSA 103.5 1 viol. ✓ Clean COc1ccc(cn1)c2cc(cc3c2oc(n3)NS(=O)(=O)c4cc(ccc4…
EUF P09467 227.4 Da LogP 4.06 TPSA 12.9 ✓ Ro5 ✓ Clean CCSSc1nc2ccccc2s1
EW0 P09467 500.0 Da LogP 4.71 TPSA 98.7 ✓ Ro5 ✓ Clean Cn1c(cc2c1c(ccc2Nc3cccc(c3)OC)Cl)C(=O)NS(=O)(=O…
FBP P09467 340.1 Da LogP -2.99 TPSA 203.4 1 viol. ✓ Clean C([C@@H]1[C@H]([C@@H]([C@](O1)(COP(=O)(O)O)O)O)…
FDP O00757 340.1 Da LogP -2.99 TPSA 203.4 1 viol. ✓ Clean C([C@@H]1[C@H]([C@@H]([C@](O1)(CO)OP(=O)(O)O)O)…
GJO P09467 508.5 Da LogP 3.83 TPSA 160.5 1 viol. ✓ Clean CC(=O)Nc1cccc(c1)c2ccc(c3c2cc([nH]3)C(=O)NS(=O)…
PO3 O00757 79.0 Da LogP -1.64 TPSA 63.2 ✓ Ro5 ✓ Clean [O-][P-](=O)[O-]
RO3 P09467 376.3 Da LogP 2.15 TPSA 91.4 ✓ Ro5 ✓ Clean Cc1ccc(cc1)S(=O)(=O)NC(=O)N=C2NC=C(S2)Br
RO5 P09467 390.3 Da LogP 2.98 TPSA 88.2 ✓ Ro5 ✓ Clean CCc1cccc(c1)S(=O)(=O)NC(=O)Nc2ncc(s2)Br
RO8 P09467 396.7 Da LogP 2.49 TPSA 91.4 ✓ Ro5 ✓ Clean c1cc(cc(c1)Cl)S(=O)(=O)NC(=O)/N=C\2/NC=C(S2)Br
TL P00636 204.4 Da LogP -0.38 TPSA 0.0 ✓ Ro5 ✓ Clean [Tl+]

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.