Overview
Basic information about this protein and its source genome.
- Accession
- PA5130
- Gene
- PA5130
- Status
- annotated
- Amino acids
- 139
- Structure source
- AlphaFold
Target profile
Computed evidence for target prioritization.
- Human off-target
- No hit
- Gut microbiome off-target
- hit
- Essential (DEG)
- Y
- Localization
- Unknown
Selected Druggability evidence
Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.
Sequence
Primary amino-acid sequence viewer.
Functional Annotations
Enzyme classification and Gene Ontology terms linked to this protein.
Gene Ontology (GO)
1- GO:0016491 Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Sequence Features
Domain/signature hits from InterPro and related databases.
Show feature table
| Start | End | DB | Term | Name |
|---|---|---|---|---|
| 12 | 30 | Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. |
| 7 | 29 | TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. |
| 43 | 131 | Pfam | PF00581 | Rhodanese-like domain |
| 43 | 131 | InterPro | IPR001763 | Rhodanese-like domain |
| 16 | 139 | SUPERFAMILY | SSF52821 | Rhodanese/Cell cycle control phosphatase |
| 16 | 139 | InterPro | IPR036873 | Rhodanese-like domain superfamily |
| 40 | 136 | SMART | SM00450 | rhod_4 |
| 40 | 136 | InterPro | IPR001763 | Rhodanese-like domain |
| 41 | 139 | Gene3D | G3DSA:3.40.250.10 | - |
| 41 | 139 | InterPro | IPR036873 | Rhodanese-like domain superfamily |
| 31 | 139 | Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. |
| 50 | 139 | ProSiteProfiles | PS50206 | Rhodanese domain profile. |
| 50 | 139 | InterPro | IPR001763 | Rhodanese-like domain |
| 44 | 131 | CDD | cd00158 | RHOD |
| 1 | 11 | Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. |
| 34 | 137 | PANTHER | PTHR43031 | FAD-DEPENDENT OXIDOREDUCTASE |
3D Structure
Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.
Loading 3D structure...
Structural evidence
0 + 1Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.
| Entry | Method | Resolution | Chain | Coverage | Links | Status |
|---|---|---|---|---|---|---|
|
AlphaFold
PA5130
|
AlphaFold | — | — | full sequence | — | Viewing |
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer
Pockets (FPOCKET)
Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).
| FPOCKET | Sticks | Spheres | Surfaces | Druggability | Labels | Zoom | Positions |
|---|---|---|---|---|---|---|---|
| 1 | 0.901 | ||||||
| 2 | 0.304 |