Protein profile

PA5175

3'(2'),5'-bisphosphate nucleotidase CysQ

Genome: NC_002516.2

Gene: cysQ PA5175 Structure source: AlphaFold UniProt Q9HU14
Amino acids 273
Annotations 7
Features 22
PDB binders 4
Druggability 0.605

Overview

Basic information about this protein and its source genome.

Accession
PA5175
Gene
cysQ PA5175
Status
annotated
Amino acids
273
Structure source
AlphaFold

Target profile

Computed evidence for target prioritization.

Human off-target
hit
Human identity (%)
27.338
Human E-value
1.49e-07
Gut microbiome off-target
hit
Essential (DEG)
Y
Localization
Cytoplasmic

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.605
Structure
Pocket

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 EC 6 GO

Enzyme Commission (EC)

1

Gene Ontology (GO)

6
  • GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
  • GO:0008441 Catalysis of the reaction: adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate.
  • GO:0000287 Binding to a magnesium (Mg) ion.
  • GO:0050427 The chemical reactions and pathways involving 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems.
  • GO:0000103 The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds.
  • GO:0006790 The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione.

Sequence Features

Domain/signature hits from InterPro and related databases.

22 records
Show feature table
Start End DB Term Name
9 254 NCBIfam TIGR01331 3'(2'),5'-bisphosphate nucleotidase CysQ
9 254 InterPro IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ
9 268 SUPERFAMILY SSF56655 Carbohydrate phosphatase
153 257 FunFam G3DSA:3.40.190.80:FF:000005 3'(2'),5'-bisphosphate nucleotidase CysQ
83 96 ProSitePatterns PS00629 Inositol monophosphatase family signature 1.
83 96 InterPro IPR020583 Inositol monophosphatase, metal-binding site
212 236 PRINTS PR00377 Inositol monophosphatase superfamily signature
212 236 InterPro IPR000760 Inositol monophosphatase-like
59 75 PRINTS PR00377 Inositol monophosphatase superfamily signature
59 75 InterPro IPR000760 Inositol monophosphatase-like
83 99 PRINTS PR00377 Inositol monophosphatase superfamily signature
83 99 InterPro IPR000760 Inositol monophosphatase-like
37 57 PRINTS PR00377 Inositol monophosphatase superfamily signature
37 57 InterPro IPR000760 Inositol monophosphatase-like
9 254 CDD cd01638 CysQ
151 259 Gene3D G3DSA:3.40.190.80 -
8 149 Gene3D G3DSA:3.30.540.10 -
7 260 PANTHER PTHR43028 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1
5 257 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ].
5 257 InterPro IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ
10 244 Pfam PF00459 Inositol monophosphatase family
10 244 InterPro IPR000760 Inositol monophosphatase-like

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold PA5175
AlphaFold full sequence Viewing
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
4 0.605

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

154 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
A3P P32179 427.2 Da LogP -1.75 TPSA 232.6 2 viol. ✓ Clean c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)…
IPD P29218 258.1 Da LogP -4.98 TPSA 173.6 ✓ Ro5 ✓ Clean [C@H]1([C@H](C([C@@H]([C@@H](C1O)O)O)OP(=O)([O-…
LIP P29218 258.1 Da LogP -4.98 TPSA 173.6 ✓ Ro5 ✓ Clean [C@H]1([C@@H](C([C@H]([C@@H](C1O)O)O)OP(=O)([O-…
SRT O33832 150.1 Da LogP -2.12 TPSA 115.1 ✓ Ro5 ✓ Clean [C@H]([C@H](C(=O)O)O)(C(=O)O)O

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.