Protein profile

PA5183a

hypothetical protein

Genome: NC_002516.2

Gene: YP_008719784.1 Structure source: ColabFold

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Amino acids 71

Annotations 3

Features 7

PDB binders 0

Druggability 0.44

Overview

Basic information about this protein and its source genome.

Accession: PA5183a
Assembly: Pseudomonas aeruginosa PAO1, complete genome
Gene: YP_008719784.1
Status: annotated
Amino acids: 71
Structure source: ColabFold

GO:0003723 Binding to an RNA molecule or a portion thereof. GO:0006109 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving carbohydrates. GO:0006402 The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.

Target profile

Computed evidence for target prioritization.

Human off-target: No hit
Gut microbiome off-target: hit
Essential (DEG): N
Localization: Unknown

Selected Druggability evidence

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.44

Structure –

Pocket –

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

3 GO

Gene Ontology (GO)

GO:0003723 Binding to an RNA molecule or a portion thereof.
GO:0006109 Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving carbohydrates.
GO:0006402 The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.

Sequence Features

Domain/signature hits from InterPro and related databases.

7 records

Show feature table

Start	End	DB	Term	Name
4	67	Pfam	PF02599	Global regulator protein family
4	67	InterPro	IPR003751	Translational regulator CsrA
1	71	Gene3D	G3DSA:2.60.40.4380	Translational regulator CsrA
1	71	InterPro	IPR036107	Carbon storage regulator superfamily
3	67	SUPERFAMILY	SSF117130	CsrA-like
3	67	InterPro	IPR036107	Carbon storage regulator superfamily
1	71	FunFam	G3DSA:2.60.40.4380:FF:000003	Carbon storage regulator

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

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Structural evidence

0 + 1

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry	Method	Resolution	Chain	Coverage	Links	Status
ColabFold PA5183A	ColabFold	—	—	full sequence	—	Viewing

Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET	Sticks	Spheres	Surfaces	Druggability	Labels	Zoom	Positions
1				0.44