Protein profile

VK055_0706

alpha/beta hydrolase fold family protein

Genome: KpATCC43816

Gene: AIK79329.1 Structure source: AlphaFold + ColabFold UniProt A0A060VHX3
Amino acids 217
Annotations 3
Features 13
PDB binders 7
Druggability 0.912

Overview

Basic information about this protein and its source genome.

Accession
VK055_0706
Gene
AIK79329.1
Status
annotated
Amino acids
217
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
Cytoplasmic
ColabFold pLDDT
95.35

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.912
Structure A0A060VHX3
Pocket Pocket 1
P2Rank 0.81
Structure A0A060VHX3
Pocket Pocket 1
ColabFold model
FPocket 0.861 · Pocket 10
P2Rank 0.959 · Pocket 1
Core conservation Accessory gene
Roary accessory
CoreCruncher accessory
Gut microbiome 3 / 4744 genomes with a hit
Normalized 0.001

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 EC 2 GO

Enzyme Commission (EC)

1

Gene Ontology (GO)

2
  • GO:0016787 Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc.
  • GO:0016740 Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.

Sequence Features

Domain/signature hits from InterPro and related databases.

13 records
Show feature table
Start End DB Term Name
28 214 SUPERFAMILY SSF53474 alpha/beta-Hydrolases
28 214 InterPro IPR029058 Alpha/Beta hydrolase fold
33 214 PANTHER PTHR43798 MONOACYLGLYCEROL LIPASE
19 216 Gene3D G3DSA:3.40.50.1820 alpha/beta hydrolase
19 216 InterPro IPR029058 Alpha/Beta hydrolase fold
40 202 Pfam PF00561 alpha/beta hydrolase fold
40 202 InterPro IPR000073 Alpha/beta hydrolase fold-1
160 174 PRINTS PR00111 Alpha/beta hydrolase fold signature
160 174 InterPro IPR000073 Alpha/beta hydrolase fold-1
62 75 PRINTS PR00111 Alpha/beta hydrolase fold signature
62 75 InterPro IPR000073 Alpha/beta hydrolase fold-1
48 61 PRINTS PR00111 Alpha/beta hydrolase fold signature
48 61 InterPro IPR000073 Alpha/beta hydrolase fold-1

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A060VHX3
AlphaFold full sequence Viewing
ColabFold VK055_0706
ColabFold full sequence Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
1 0.912

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 15.04 0.743

Ligand evidence

Ligands grouped by evidence source. PDB ligands keep the source crystal visible, and loaded crystals can be opened directly in the structure viewer.

157 records

Structural evidence inferred from similar proteins. The source crystal indicates where the ligand was observed; the UniProt column identifies the homologous protein carrying that ligand.

Show only:
Ligand Source crystal UniProt (homolog) MW · LogP · TPSA Lipinski PAINS SMILES
6OR P9WNH5 243.1 Da LogP 1.95 TPSA 74.6 ✓ Ro5 ✓ Clean c1c(cc(c(c1Cl)O)Cl)S(=O)(=O)O
6OT P9WNH5 226.1 Da LogP 1.64 TPSA 60.2 ✓ Ro5 ✓ Clean c1c(cc(cc1Cl)Cl)S(=O)(=O)N
FGZ P9WNH5 207.0 Da LogP 2.40 TPSA 57.5 ✓ Ro5 ✓ Clean c1c(cc(c(c1Cl)O)Cl)C(=O)O
HPK P9WNH5 217.2 Da LogP 0.13 TPSA 74.3 ✓ Ro5 ✓ Clean c1ccc(cc1)C(=O)C\C=C\C(=O)C(=O)[O-]
KEK P9WNH5 293.7 Da LogP 1.35 TPSA 74.3 ✓ Ro5 ✓ Clean C[C@H](\C=C\C(=O)C(=O)[O-])C(=O)CCc1ccccc1Cl
KEM P9WNH5 349.4 Da LogP 0.60 TPSA 111.6 ✓ Ro5 ✓ Clean C[C@H](\C=C\C(=O)C(=O)[O-])C(=O)CC[C@@H]1[C@H]2…
MLT A0A0M3KKY6 134.1 Da LogP -1.09 TPSA 94.8 ✓ Ro5 ✓ Clean C([C@H](C(=O)O)O)C(=O)O

PDB and ChEMBL records on this protein are shown in full. ChEMBL records from similar proteins are capped at the top 100 per protein (by pchembl) and ZINC at the top 50 (Tanimoto ≥ 0.5). ADME columns are descriptor-based screening flags, not experimental toxicity results.