Protein profile

VK055_0917

hypothetical protein

Genome: KpATCC43816

Gene: AIK79541.1 Structure source: AlphaFold + ColabFold UniProt A0A447RHU1
Export view
Amino acids 207
Annotations 1
Features 3
PDB binders 0
Druggability 0.464

Overview

Basic information about this protein and its source genome.

Accession
VK055_0917
Assembly
Klebsiella pneumoniae subsp. pneumoniae strain ATCC 43816 KPPR1, complete genome
Gene
AIK79541.1
Status
annotated
Amino acids
207
Structure source
AlphaFold + ColabFold
GO
GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
Cytoplasmic
ColabFold pLDDT
95.71

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.464
Structure A0A447RHU1
Pocket Pocket 2
P2Rank 0.648
Structure A0A447RHU1
Pocket Pocket 1
ColabFold model
FPocket 0.734 · Pocket 11
P2Rank 0.67 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 60 / 4744 genomes with a hit
Normalized 0.013

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

1 GO

Gene Ontology (GO)

1
  • GO:0005886 The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Sequence Features

Domain/signature hits from InterPro and related databases.

3 records
Show feature table
Start End DB Term Name
1 207 Hamap MF_01065 UPF0257 lipoprotein YnfC [ynfC].
1 207 InterPro IPR010646 Uncharacterised protein family UPF0257
1 207 Pfam PF06788 Uncharacterised protein family (UPF0257)

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

Loading 3D structure...

Legend High Medium Low

Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A447RHU1
AlphaFold — — full sequence — Viewing
ColabFold VK055_0917
ColabFold — — full sequence — Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (FPOCKET)

Showing top-ranked FPocket candidates by druggability. Druggability is color-coded: high (0.7 or higher), medium (0.4 to 0.69), low (below 0.4).

FPOCKET Sticks Spheres Surfaces Druggability Labels Zoom Positions
2 0.464
1 0.345
5 0.001
12 0.0

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 14.68 0.648
2 5.73 0.23
3 2.71 0.066
4 1.43 0.015
5 0.69 0.001