Protein profile

VK055_0981

hypothetical protein

Genome: KpATCC43816

Gene: AIK79604.1 Structure source: AlphaFold + ColabFold UniProt A0A0H3GSA0
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Amino acids 291
Annotations 0
Features 20
PDB binders 0
Druggability 0.04

Overview

Basic information about this protein and its source genome.

Accession
VK055_0981
Assembly
Klebsiella pneumoniae subsp. pneumoniae strain ATCC 43816 KPPR1, complete genome
Gene
AIK79604.1
Status
annotated
Amino acids
291
Structure source
AlphaFold + ColabFold

Target profile

Computed evidence for target prioritization.

Human off-target
No hit
Human identity (%)
0.0
Gut microbiome off-target
hit
Essential (DEG)
N
DEG identity (%)
0.0
Localization
Unknown
ColabFold pLDDT
85.19

Selected Druggability evidence

AlphaFold / UniProt model

Selected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.

FPocket 0.04
Structure A0A0H3GSA0
Pocket Pocket 10
P2Rank 0.086
Structure A0A0H3GSA0
Pocket Pocket 1
ColabFold model
FPocket 0.275 · Pocket 5
P2Rank 0.138 · Pocket 1
Core conservation Conserved core gene
Roary core
CoreCruncher core
Gut microbiome 106 / 4744 genomes with a hit
Normalized 0.022

Sequence

Primary amino-acid sequence viewer.

Functional Annotations

Enzyme classification and Gene Ontology terms linked to this protein.

No GO or EC annotations are currently loaded for this protein.

Sequence Features

Domain/signature hits from InterPro and related databases.

20 records
Show feature table
Start End DB Term Name
216 291 SUPERFAMILY SSF159871 YdgH-like
216 291 InterPro IPR036275 YdgH-like superfamily
220 291 Gene3D G3DSA:3.30.1660.10 -
220 291 InterPro IPR025543 Dodecin-like
1 65 Gene3D G3DSA:3.30.1660.10 -
1 65 InterPro IPR025543 Dodecin-like
1 291 PANTHER PTHR34156 OUTER MEMBRANE PROTEIN-RELATED-RELATED
9 65 Pfam PF07338 YdgH/BhsA/McbA-like domain
9 65 InterPro IPR010854 YdgH/BhsA/McbA-like domain
236 291 Pfam PF07338 YdgH/BhsA/McbA-like domain
236 291 InterPro IPR010854 YdgH/BhsA/McbA-like domain
94 149 Pfam PF07338 YdgH/BhsA/McbA-like domain
94 149 InterPro IPR010854 YdgH/BhsA/McbA-like domain
2 69 SUPERFAMILY SSF159871 YdgH-like
2 69 InterPro IPR036275 YdgH-like superfamily
1 291 NCBIfam NF040471 DUF1471 family protein YdgH
83 152 SUPERFAMILY SSF159871 YdgH-like
83 152 InterPro IPR036275 YdgH-like superfamily
81 149 Gene3D G3DSA:3.30.1660.10 -
81 149 InterPro IPR025543 Dodecin-like

3D Structure

Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.

3D visualization script Full viewer

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Structural evidence

0 + 2

Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.

Entry Method Resolution Chain Coverage Links Status
AlphaFold AF_A0A0H3GSA0
AlphaFold — — full sequence — Viewing
ColabFold VK055_0981
ColabFold — — full sequence — Loaded
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer

Pockets (P2RANK)

Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).

P2RANK Sticks Spheres Surfaces Score Probability Labels Zoom Positions
1 1.81 0.034
2 1.7 0.029