Overview
Basic information about this protein and its source genome.
- Accession
- VK055_1132
- Gene
- AIK79755.1
- Status
- annotated
- Amino acids
- 163
- Structure source
- AlphaFold + ColabFold
Target profile
Computed evidence for target prioritization.
- Human off-target
- No hit
- Human identity (%)
- 0.0
- Gut microbiome off-target
- hit
- Essential (DEG)
- N
- DEG identity (%)
- 0.0
- Localization
- Cytoplasmic
- ColabFold pLDDT
- 83.96
Selected Druggability evidence
AlphaFold / UniProt modelSelected Druggability is the FPocket score chosen for ranking using the curated structure priority. The 3D viewer may show a different loaded structure, so its visible pockets can differ.
Sequence
Primary amino-acid sequence viewer.
Functional Annotations
Enzyme classification and Gene Ontology terms linked to this protein.
No GO or EC annotations are currently loaded for this protein.
Sequence Features
Domain/signature hits from InterPro and related databases.
Show feature table
| Start | End | DB | Term | Name |
|---|---|---|---|---|
| 5 | 157 | NCBIfam | TIGR03358 | type VI secretion system contractile sheath small subunit |
| 5 | 157 | InterPro | IPR008312 | Type VI secretion system sheath protein TssB1 |
| 1 | 163 | PIRSF | PIRSF028301 | UCP028301 |
| 1 | 163 | InterPro | IPR008312 | Type VI secretion system sheath protein TssB1 |
| 4 | 161 | PANTHER | PTHR35850 | CYTOPLASMIC PROTEIN-RELATED |
| 4 | 161 | InterPro | IPR008312 | Type VI secretion system sheath protein TssB1 |
| 7 | 157 | Pfam | PF05591 | Type VI secretion system, VipA, VC_A0107 or Hcp2 |
| 7 | 157 | InterPro | IPR008312 | Type VI secretion system sheath protein TssB1 |
3D Structure
Selected loaded structure. Experimental PDB entries may cover only a portion of the sequence; predicted models typically cover the full protein.
Loading 3D structure...
Structural evidence
0 + 2Experimental PDB entries and predicted models. Click Switch to display a different structure in the viewer.
| Entry | Method | Resolution | Chain | Coverage | Links | Status |
|---|---|---|---|---|---|---|
|
AlphaFold
AF_A0A332GYE7
|
AlphaFold | — | — | full sequence | — | Viewing |
|
ColabFold
VK055_1132
|
ColabFold | — | — | full sequence | — | Loaded |
Pocket details FPocket · P2Rank — toggle visibility and zoom from here, or open full viewer
Pockets (P2RANK)
Showing top-ranked P2Rank candidates by probability. Probability is color-coded per P2Rank calibration: high (≥ 0.5), medium (0.2 – 0.49), low (< 0.2).
| P2RANK | Sticks | Spheres | Surfaces | Score | Probability | Labels | Zoom | Positions |
|---|---|---|---|---|---|---|---|---|
| 1 | 5.72 | 0.277 | ||||||
| 2 | 2.59 | 0.074 |